The data below for reported frequencies of clinical features in individuals with PURA syndrome are based on 223 individuals reported in the literature with a heterozygous PURA pathogenic variant. Frequencies of clinical features in individuals with 5q31.3 deletion syndrome have not been included, as these nonrecurrent chromosomal deletions are of varying sizes; thus, genetically, they represent a comparatively heterogeneous group.
PURA Syndrome
Early-onset manifestations are wide ranging and can include hypotonia, hypothermia, hypersomnolence, feeding difficulties, excessive hiccups, recurrent central and obstructive apneas, epileptic seizures, abnormal nonepileptic movements, including an exaggerated startle, and vision problems.
Musculoskeletal manifestations, congenital heart defects, urogenital malformations, and endocrine disorders are less commonly described [Hunt et al 2014, Lalani et al 2014, Tanaka et al 2015, Johannesen et al 2021, Taniguchi et al 2025].
Development. All 223 individuals reported to date have had moderate-to-severe neurodevelopmental delay.
Motor development is almost always delayed, but with variable severity. Many individuals never achieve independent ambulation. However, 56% (67/120) achieved ambulation with or without support (minimum prevalence: 39% in those older than age 18 months). The age of ambulation achievement ranges from 16 months to 10 years. The gait of affected children is typically broad based but can be normal or near normal in some.
Speech, language, and communication. Both speech and language are typically impaired. Most individuals are non-speaking, meaning speech is significantly impacted or not used at all; only 6.5% (12/184) of all individuals older than age 12 months are reported to have developed speech. For those who are non-speaking, other means of communication should be supported early and throughout life. The use of augmentative and alternative communication (AAC) has proven beneficial in some children, especially when implemented early and consistently. This can include the use of unaided AAC (i.e., gesture and body movement) and/or aided AAC (i.e., picture-based communication systems or eye gaze tablet devices). Speech-language pathologist input should be in collaboration with physical or occupational therapists to optimize AAC selection and use [M St John & A Morgan, unpublished data].
Some non-speaking children have better receptive language skills compared to expressive language skills; however, both can be significantly impacted. Thus, individuals with PURA syndrome may be able to understand more than they can communicate (either with speech or AAC) [M St John & A Morgan, unpublished data].
A smaller proportion of individuals use speech to communicate. These individuals may have delayed communication milestones (i.e., first words after age 2 years). There is a wide range of ability within this speaking subgroup, ranging from mild-to-severe speech disorder (e.g., dysarthria and childhood apraxia of speech) [Kaspi et al 2023; Hildebrand et al 2024; M St John & A Morgan, unpublished data].
Intellectual disability is considered a universal feature; although almost all affected individuals are in the moderate-to-profound range of intellectual disability, very rarely the degree of intellectual disability may be milder [D Hunt, personal observation].
Neurologic. Hypotonia (98% [180/184]; minimum prevalence: 81%) and hypersomnolence (83% [71/86]; minimum prevalence: 32%) are common at birth.
Epilepsy has been reported in at least 50% of individuals (52% [98/187]; minimum prevalence: 44%). However, given that the median age of seizure onset is three years, this is likely to have been underestimated, as 30% of individuals in the published literature were younger than age three years at the time of the report. The age of seizure onset ranges from the neonatal period to 24 years.
The lifetime risk of developing epilepsy is very high: 87% (20/23) of individuals age 18 years or older were reported to have epilepsy.
Seizure types can be varied, including infantile spasms, focal, complex focal, tonic, generalized tonic-clonic, atonic, absence, and myoclonic. Myoclonic seizures are common. Nonepileptic myoclonus is also common and should be distinguished from true seizures (see Management). Reflex epilepsy has been reported. In some instances, the seizure disorder progresses to Lennox-Gastaut syndrome. The seizures are often resistant to anti-seizure medications.
Nonepileptic
movements. Exaggerated startle response is very common, particularly in individuals specifically examined for this finding (74% [50/68]; minimum prevalence: 22%). Other nonepileptic movements that may be seen include subcortical myoclonus, dystonia, dyskinesia, and dysconjugate eye movements (50% [30/60]; minimum prevalence: 14%).
Nystagmus is present in 43% (35/82; minimum prevalence: 16%) of individuals specifically examined for this finding.
Abnormal MRI brain findings present in most individuals (64% [117/184]) are:
Delayed myelination (17% [32/184])
Parenchymal atrophy and/or ventriculomegaly (15% [27/184])
Excessive extra-axial fluid spaces (10% [18/184])
Focal white matter signal abnormalities (6% [11/184])
Abnormalities of white matter volume, excluding abnormalities of the corpus callosum (7% [12/184])
Volume loss of the corpus callosum (5% [10/184])
Less common MRI findings include arachnoid cysts, intraparenchymal cysts, periventricular leukomalacia (PVL), other types of white matter abnormalities (notwithstanding delayed myelination, hypomyelination, or PVL), and cerebellar vermis hypoplasia.
Single reports of MRI findings include bilateral polymicrogyria, basal ganglia calcifications, mesial temporal sclerosis, absent septum pellucidum, mild cerebellar tonsillar ectopia, persistent cavum septum pellucidum and cavum vergae, and cystic dilatation of the quadrigeminal cistern and mega cisterna magna.
MR spectroscopy, performed in some individuals, was reported as abnormal in at least one individual, who had lactate peaks in the lateral ventricles [Mroczek et al 2021].
Nerve conduction studies / electromyography. Electrodiagnostic studies were normal in about half of the individuals on whom they have been reported. When abnormal, findings were most often suggestive of myopathy or neuromuscular junction pathology.
Ophthalmologic. Strabismus (53% [50/94]; minimum prevalence: 22%) and refraction abnormalities (33% [18/54]; minimum prevalence: 8%) are the most frequently reported abnormalities in individuals specifically examined for these findings. Cerebral visual impairment is present in 18% of affected individuals (11/61; minimum prevalence: 5%).
Respiratory. Apnea and hypoventilation are present in more than three quarters of affected neonates (78% [117/150]; minimum prevalence: 53%), of whom 32% (38/117) required mechanical ventilation, usually as temporary non-invasive ventilation. In at least three instances, tracheostomy was required [Lalani et al 2014, Johannesen et al 2021].
In most affected individuals, the episodes of apnea and hypoventilation resolved after the first year of life; however, in a minority, apnea persisted or recurred during an acute respiratory illness (43% of individuals specifically examined for these findings; minimum prevalence: 10%).
Aspiration pneumonia due to hypotonia and dysphagia has been reported.
Gastrointestinal. A significant number of neonates have severe feeding difficulties (94% [165/176]; minimum prevalence: 74%) and/or gastroesophageal reflux disease (50% [17/34]; minimum prevalence: 8%). Dysphagia often persists throughout life. Drooling is common. Constipation has been reported in most individuals (69% [61/88]; minimum prevalence: 27%).
Genital. Genital abnormalities occur less frequently. The most frequently reported is cryptorchidism (29% [9/31]; minimum prevalence: 8%). Other rare abnormalities include hypoplastic external female genitalia.
Congenital anomalies of the kidneys or urinary tract. Hydronephrosis and urolithiasis occur rarely.
Skeletal. The skeletal phenotype is often overlooked in the published literature. Of those individuals in whom any reference is made to spinal issues, nearly half had scoliosis (47% [34/72]). However, it is likely that the true prevalence is lower, as pertinent negative findings may have been omitted in many reports. Nonetheless, the prevalence of scoliosis in the published medical literature is at least 15% (34/223). Scoliosis often develops in adolescence or early teenage years; in some individuals, progression can be rapid, especially during the pubertal growth spurt.
In individuals in whom any reference was made to hip issues, approximately one third had hip dysplasia (34% [19/56]). Although this may be an overestimate, the prevalence is at least 8% (19/223). Similarly, the prevalence of hip subluxations or dislocations (7/7) is at least 3% (7/223). Little has been published about the natural history of hip dysplasia in PURA syndrome; usually, it is not detected at birth but can develop later.
Bone density is infrequently assessed in individuals with PURA syndrome; however, in those in whom any reference is made to bone density, half had osteopenia or osteoporosis (50% [7/14]). The true prevalence of low bone density may be significantly lower, but it is at least 3% (7/223). Anecdotally, bone density can be very low, even in the absence of any pathologic fractures [D Hunt, personal observation].
Endocrine. Anterior pituitary dysregulation may be within the spectrum of PURA syndrome based on the following observations [Hunt et al 2014]:
Disturbed levels of gonadotropins (40% [4/10]; minimum prevalence: 2%) and medical treatment for precocious puberty (100% [3/3]; minimum prevalence: 1%). Delayed puberty has been reported in at least 10 individuals (minimum prevalence: 5%).
A blunted cortisol response (25% [2/8]; minimum prevalence: 1%)
Hypothyroidism (19% [8/43]; minimum prevalence: 4%)
Elevated prolactin levels in one reported individual
Although low serum vitamin D concentrations (41% [16/39]; minimum prevalence: 7%) have been reported, the true prevalence may be higher, as serum vitamin D concentrations are often not measured routinely and deficiency may not be obvious clinically.
Cardiovascular. Structural heart defects in 20% of individuals (13/66; minimum prevalence: 6%) include ventricular septal defect, persistent foramen ovale, persistent ductus arteriosus, pulmonic stenosis, atrial septal defect, bicuspid aortic valve, mild ventricular hypertrophy, and aberrant left subclavian artery. It should be noted that these data may represent an underestimate (particularly of minor cardiac abnormalities that may not manifest obvious signs of disease), as not all individuals had an echocardiogram as a matter of course.
Heart rhythm abnormalities reported occasionally include unexplained tachycardia/bradycardia and increased QTc interval in which a contribution of other (genetic) causes is possible.
Other
Neonatal hypothermia (38% [24/63]; minimum prevalence: 11%). Although difficulties in regulating body temperature in the neonatal period appear to occur frequently, descriptions of them are limited.
Excessive hiccups in utero, which are rarely reported in the published medical literature, are frequently disclosed on direct questioning. Excessive hiccups may be present in the neonatal period and can sometimes persist [D Hunt, personal observation].