1ELK,3LDZ,1MHQ


Conserved Protein Domain Family
VHS

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smart00288: VHS 
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Domain present in VPS-27, Hrs and STAM
Unpublished observations. Domain of unknown function.
Statistics
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PSSM-Id: 197630
Aligned: 22 rows
Threshold Bit Score: 117.012
Created: 13-Jul-2011
Updated: 2-Oct-2020
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1ELK_A     17 VGQRIEKATDGSLQ--S--EDWALNMEICDIINET-EEGPKDALRAVKKRIVgN--KNFHEVMLALTVLETCVKNCGHRF 89  human
AAB52480    4 YEDLLGKITAPTIT--V--ENWEGILAFCDMINND-FEGSKTGIKSLRKRLN-N--RDPHVVLLAISVLDSCWANCEERF 75  Caenorhabditis ele...
AAB63649   13 RSRMIDAVTSDEDK--V--APVYKLEEICDLLRSShVSIVKEFSEFILKRLD-N--KSPIVKQKALRLIKYAVGKSGSEF 85  thale cress
3LDZ_A      6 FDQDVEKATSEMNT--A--EDWGLILDICDKVGQS-RTGPKDCLRSIMRRVN-H--KDPHVAMQALTLLGACVSNCGKIF 77  human
1MHQ_A      2 LELWLNKATDPSMS--E--QDWSAIQNFCEQVNTD-PNGPTHAPWLLAHKIQ-S--PQEKEALYALTVLEMCMNHCGEKF 73  human
NP_593787  11 FASDIEKATSETLP--AgsEEISLYLEISDQIRSK-SVDPKFAMRILKSRID-H--SNPNVQIMALKLTDTCVKNGGSGF 84  Schizosaccharomyce...
EDN62231    8 IRNALLKATDPKLR--S--DNWQYILDVCDLVKEDpEDNGQEVMSLIEKRLE-Q--QDANVILRTLSLTVSLAENCGSRL 80  Saccharomyces cere...
EGA60671    9 LDALIEQATSESIPngD--LDLPIALEISDVLRSR-RVNPKDSMRCIKKRIL-NtaDNPNTQLSSWKLTNICVKNGGTPF 84  Saccharomyces cere...
NP_596569  13 VTTYIDRLTSRDTD--D--EDLSGIVQLSEAVNLT-VTGPREASRTLRKKLK-Y--STPHEQVRALVILQALIENAGSHF 84  Schizosaccharomyce...
NP_509853   9 IDYWVCRATDRFIG--D--EERIKALDFIIESIYKqPASALLAVDLFSHKLS-S--PSQEEAMLTIRALDYLVRNGGEKV 81  nematode
1ELK_A     90 HVLVASQDFVEsVLVRTILPKNNPPt---iVHDKVLNLIQSWADAF-R-SSPDLTGVVTIYEDLRRKG 152 human
AAB52480   76 RKEVSSAQFIN-ELKALCTSSQRQ------VAEKMRLTVQKWVDTEcK-TEQSLSLIVTLHKNLVADG 135 Caenorhabditis elegans
AAB63649   86 RREMQRNSVAVrNLFHYKGHPDPLKgd--aLNKAVRETAHETISAI---FSEENGTKPAAPESINRRI 148 thale cress
3LDZ_A     78 HLEVCSRDFAS-EVSNVLNK--GHPk----VCEKLKALMVEWTDEF-K-NDPQLSLISAMIKNLKEQG 136 human
1MHQ_A     74 HSEVAKFRFLN-ELIKVLSPKYLGSwatgkVKGRVIEILFSWTVWF-----PEDIKIRDAYQMLKKQG 135 human
NP_593787  85 LLEIASREFMD-NLVSILRSPAGIDe---dVKMVILRYIQSWALAV-PdTNSPLSYIIHVYQNLKdgd 147 Schizosaccharomyces pombe 972h-
EDN62231   81 RQEISSKNFTS-LLYALIESHSVHIt----LKKAVTDVVKQLSDSF-K-DDPSLRAMGDLYDKIKRKa 141 Saccharomyces cerevisiae YJM789
EGA60671   85 IKEICSREFMD-TMEHVILREDSNEe----LSELVKTILYELYVAF-K-NDSQLNYVAKVYDKLISRG 145 Saccharomyces cerevisiae FostersO
NP_596569  85 LQNFSDEKLEDrMLQCATNSEYSKP-----VRKRAIHMIKLWHNDY-S-NVRGMESMSSLVSRLPQRQ 145 Schizosaccharomyces pombe 972h-
NP_509853  82 HERCGRYKFLN-ELVRLIAPKYNGKltsdaLKTEIIKLLFIWQLSI-K-HIPKYKQVYESLKLSKIIt 146 nematode
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