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EGR1 early growth response 1 [ Felis catus (domestic cat) ]

Gene ID: 101088388, updated on 8-Mar-2024

Summary

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Official Symbol
EGR1
Official Full Name
early growth response 1
Primary source
VGNC:VGNC:102193
See related
EnsemblRapid:ENSFCTG00005020364
Gene type
protein coding
RefSeq status
MODEL
Organism
Felis catus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Feliformia; Felidae; Felinae; Felis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: A1
Exon count:
2
Annotation release Status Assembly Chr Location
105 current F.catus_Fca126_mat1.0 (GCF_018350175.1) A1 NC_058368.1 (114647557..114651125)
104 previous assembly Felis_catus_9.0 (GCF_000181335.3) A1 NC_018723.3 (117036622..117040432)

Chromosome A1 - NC_058368.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC123386001 Neighboring gene receptor accessory protein 2 Neighboring gene eukaryotic translation termination factor 1 Neighboring gene uncharacterized LOC111560872 Neighboring gene small nucleolar RNA SNORD63 Neighboring gene heat shock protein family A (Hsp70) member 9

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Zif268 mRNA Expression Patterns Reveal a Distinct Impact of Early Pattern Vision Deprivation on the Development of Primary Visual Cortical Areas in the Cat. Laskowska-Macios K, et al. Cereb Cortex, 2015 Oct. PMID 25205660, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
early growth response protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Felis catus Annotation Release 105 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference F.catus_Fca126_mat1.0 Primary Assembly

Genomic

  1. NC_058368.1 Reference F.catus_Fca126_mat1.0 Primary Assembly

    Range
    114647557..114651125
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003980809.5 → XP_003980858.1  early growth response protein 1

    UniProtKB/TrEMBL
    A0A2I2U5Y8
    Related
    ENSFCTP00005042932.1, ENSFCTT00005058461.1
    Conserved Domains (6) summary
    sd00017
    Location:340 → 362
    ZF_C2H2; C2H2 Zn finger [structural motif]
    pfam00096
    Location:338 → 362
    zf-C2H2; Zinc finger, C2H2 type
    pfam05687
    Location:452 → 505
    BES1_N; BES1/BZR1 plant transcription factor, N-terminal
    pfam11914
    Location:447 → 530
    DUF3432; Domain of unknown function (DUF3432)
    pfam11928
    Location:133 → 209
    DUF3446; Domain of unknown function (DUF3446)
    pfam13465
    Location:382 → 407
    zf-H2C2_2; Zinc-finger double domain
Nucleotide Protein
Heading Accession and Version

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