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TSHZ2 teashirt zinc finger homeobox 2 [ Saimiri boliviensis (Bolivian squirrel monkey) ]

Gene ID: 101052371, updated on 8-Mar-2024

Summary

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Gene symbol
TSHZ2
Gene description
teashirt zinc finger homeobox 2
See related
EnsemblRapid:ENSSBOG00000024081
Gene type
protein coding
RefSeq status
MODEL
Organism
Saimiri boliviensis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Platyrrhini; Cebidae; Saimiriinae; Saimiri
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current BCM_Sbol_2.0 (GCF_016699345.1) Unplaced Scaffold NW_024100935.1 (44807570..45323693)

NW_024100935.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 64 Neighboring gene zinc finger protein 64 Neighboring gene 5S ribosomal RNA Neighboring gene uncharacterized LOC104652110 Neighboring gene 40S ribosomal protein S27-like Neighboring gene zinc finger protein 217

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_024100935 Unplaced Scaffold Reference BCM_Sbol_2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
teashirt homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Saimiri boliviensis Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference BCM_Sbol_2.0 Primary Assembly

Genomic

  1. NW_024100935.1 Reference BCM_Sbol_2.0 Primary Assembly

    Range
    44807570..45323693
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003932591.3 → XP_003932640.1  teashirt homolog 2 isoform X1

    UniProtKB/TrEMBL
    A0A2K6T4T9, A0A2K6T4V0
    Related
    ENSSBOP00000014672.1, ENSSBOT00000031470.2
    Conserved Domains (2) summary
    cd00086
    Location:842 → 910
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    sd00020
    Location:217 → 239
    ZF_C2H2; C2H2 Zn finger [structural motif]

  2. XM_010343129.2 → XP_010341431.1  teashirt homolog 2 isoform X2

    UniProtKB/TrEMBL
    A0A2K6T4V0
    Conserved Domains (2) summary
    cd00086
    Location:842 → 910
    homeodomain; Homeodomain; DNA binding domains involved in the transcriptional regulation of key eukaryotic developmental processes; may bind to DNA as monomers or as homo- and/or heterodimers, in a sequence-specific manner.
    sd00020
    Location:217 → 239
    ZF_C2H2; C2H2 Zn finger [structural motif]
Nucleotide Protein
Heading Accession and Version

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