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    SNTN sentan, cilia apical structure protein [ Pan troglodytes (chimpanzee) ]

    Gene ID: 747890, updated on 17-Aug-2024

    Summary

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    Official Symbol
    SNTNprovided by VGNC
    Official Full Name
    sentan, cilia apical structure proteinprovided by VGNC
    Primary source
    VGNC:VGNC:9699
    Locus tag
    CK820_G0004824
    See related
    Ensembl:ENSPTRG00000015074
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Pan troglodytes
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 2
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 2 NC_086015.1 (67628717..67641289)
    RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (67628425..67640997)

    Chromosome 2 - NC_086015.1Genomic Context describing neighboring genes Neighboring gene synaptoporin Neighboring gene uncharacterized LOC107970673 Neighboring gene uncharacterized LOC112208636 Neighboring gene uncharacterized LOC134809567 Neighboring gene chromosome 3 C3orf49 homolog Neighboring gene THO complex subunit 7 Neighboring gene ataxin 7

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium-dependent protein binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables transition metal ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    sentan

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Genomic

    1. NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

      Range
      67628717..67641289
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_001174574.5 → XP_001174574.2  sentan isoform X1

      UniProtKB/TrEMBL
      A0A2I3TR69, A0A2J8P7C7, A0A2J8P7D6, A0A6D2W8R2, A0A6D2Y3E3, H2QMV9
      Related
      ENSPTRP00000091712.1
      Conserved Domains (1) summary
      cd00213
      Location:54 → 138
      S-100; S-100: S-100 domain, which represents the largest family within the superfamily of proteins carrying the Ca-binding EF-hand motif. Note that this S-100 hierarchy contains only S-100 EF-hand domains, other EF-hands have been modeled separately. S100 ...

    2. XM_054682601.2 → XP_054538576.1  sentan isoform X2

      UniProtKB/TrEMBL
      A0A2J8P7D6, A0A6D2Y3E3, H2QMV9
    Nucleotide Protein
    Heading Accession and Version

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    Research Materials