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    AZGP1 alpha-2-glycoprotein 1, zinc-binding [ Bos taurus (cattle) ]

    Gene ID: 508800, updated on 4-Apr-2024

    Summary

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    Official Symbol
    AZGP1provided by VGNC
    Official Full Name
    alpha-2-glycoprotein 1, zinc-bindingprovided by VGNC
    Primary source
    VGNC:VGNC:26367
    See related
    BGD:BT20994; Ensembl:ENSBTAG00000026236
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Also known as
    ZAG
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 25
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 25 NC_037352.1 (36445777..36450266, complement)

    Chromosome 25 - NC_037352.1Genomic Context describing neighboring genes Neighboring gene zinc finger and SCAN domain containing 21 Neighboring gene zinc finger with KRAB and SCAN domains 1 Neighboring gene uncharacterized LOC112444279 Neighboring gene gap junction protein gamma 3 Neighboring gene transfer RNA valine (anticodon CAC) Neighboring gene tripartite motif containing 4

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037352.1 Chromosome 25 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Genotype and haplotype analysis of the AZGP1 gene in cattle. Zhang B, et al. Mol Biol Rep, 2012 Dec. PMID 23073769
    2. [Polymorphisms of ZAG gene with growth traits in Jiaxian red cattle]. Guo YK, et al. Yi Chuan, 2008 Nov. PMID 19073549
    3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    4. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. Polymorphisms in the AZGP1 gene were associated with growth traits.
      Title: Genotype and haplotype analysis of the AZGP1 gene in cattle.
    2. association analysis of different genotypes with some of the growth and development traits
      Title: [Polymorphisms of ZAG gene with growth traits in Jiaxian red cattle].
    Submit: New GeneRIF Correction

    General gene information

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    Markers

    Homology

    Clone Names

    • MGC126975

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in immune response IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in external side of plasma membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in extracellular space IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    zinc-alpha-2-glycoprotein
    Names
    Zn-alpha-2-GP
    Zn-alpha-2-glycoprotein

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001034331.1 → NP_001029503.1  zinc-alpha-2-glycoprotein precursor

      See identical proteins and their annotated locations for NP_001029503.1

      Status: PROVISIONAL

      Source sequence(s)
      BC102237
      UniProtKB/Swiss-Prot
      Q3ZCH5
      Related
      ENSBTAP00000037042.3, ENSBTAT00000037204.3
      Conserved Domains (2) summary
      cd07698
      Location:202 → 293
      IgC_MHC_I_alpha3; Class I major histocompatibility complex (MHC) alpha chain immunoglobulin domain
      cl08246
      Location:23 → 198
      MHC_I; Class I Histocompatibility antigen, domains alpha 1 and 2

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037352.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      36445777..36450266 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q3ZCH5.1 GenPept UniProtKB/Swiss-Prot:Q3ZCH5

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

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