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    PIGF phosphatidylinositol glycan anchor biosynthesis class F [ Canis lupus familiaris (dog) ]

    Gene ID: 474580, updated on 5-Mar-2024

    Summary

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    Official Symbol
    PIGFprovided by VGNC
    Official Full Name
    phosphatidylinositol glycan anchor biosynthesis class Fprovided by VGNC
    Primary source
    VGNC:VGNC:44532
    See related
    Ensembl:ENSCAFG00845027939
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Canis lupus familiaris (sub-species: familiaris)
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 10
    Exon count:
    9
    Annotation release Status Assembly Chr Location
    106 current ROS_Cfam_1.0 (GCF_014441545.1) 10 NC_051814.1 (49675215..49711194, complement)
    106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 10 NC_006592.4 (48658441..48694179, complement)
    106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 10 NC_049231.1 (49856593..49892361, complement)
    106 current UMICH_Zoey_3.1 (GCF_005444595.1) 10 NC_049270.1 (49383207..49419084, complement)
    106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 10 NC_049751.1 (49673490..49709226, complement)

    Chromosome 10 - NC_051814.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111097847 Neighboring gene ATPase H+ transporting V1 subunit E2 Neighboring gene ras homolog family member Q Neighboring gene uncharacterized LOC106559415 Neighboring gene CXXC repeat containing interactor of PDZ3 domain Neighboring gene uncharacterized LOC111097738

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Process Evidence Code Pubs
    involved_in GPI anchor biosynthetic process IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in endoplasmic reticulum membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    phosphatidylinositol-glycan biosynthesis class F protein
    XP_005626138.1
    XP_005626139.1
    XP_022280391.1
    XP_038345133.1
    XP_038345134.1
    XP_038345135.1
    XP_038345137.1
    XP_038407135.1
    XP_038407136.1
    XP_038407137.1
    XP_038407138.1
    XP_038471034.1
    XP_038471035.1
    XP_038471036.1
    XP_038471037.1
    XP_038536418.1
    XP_038536419.1
    XP_038536420.1
    XP_038536421.1
    XP_531809.2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ROS_Cfam_1.0

    Genomic

    1. NC_051814.1 Reference ROS_Cfam_1.0

      Range
      49675215..49711194 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038680490.1 → XP_038536418.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X1

      UniProtKB/TrEMBL
      A0A8C0LP71, A0A8C0S322, A0A8C0YSP8, A0A8I3PUP6, A0A8I3Q380
      Related
      ENSCAFP00845038704.1, ENSCAFT00845049321.1
      Conserved Domains (1) summary
      pfam06699
      Location:21 → 204
      PIG-F; GPI biosynthesis protein family Pig-F

    2. XM_038680491.1 → XP_038536419.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X1

      UniProtKB/TrEMBL
      A0A8C0LP71, A0A8C0S322, A0A8C0YSP8, A0A8I3PUP6, A0A8I3Q380
      Conserved Domains (1) summary
      pfam06699
      Location:21 → 204
      PIG-F; GPI biosynthesis protein family Pig-F

    3. XM_038680493.1 → XP_038536421.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X3

      Conserved Domains (1) summary
      pfam06699
      Location:21 → 145
      PIG-F; GPI biosynthesis protein family Pig-F

    4. XM_038680492.1 → XP_038536420.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X2

      Conserved Domains (1) summary
      pfam06699
      Location:21 → 145
      PIG-F; GPI biosynthesis protein family Pig-F

    Alternate UMICH_Zoey_3.1

    Genomic

    1. NC_049270.1 Alternate UMICH_Zoey_3.1

      Range
      49383207..49419084 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038489205.1 → XP_038345133.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X1

      Conserved Domains (1) summary
      pfam06699
      Location:21 → 204
      PIG-F; GPI biosynthesis protein family Pig-F

    2. XM_038489206.1 → XP_038345134.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X1

      Conserved Domains (1) summary
      pfam06699
      Location:21 → 204
      PIG-F; GPI biosynthesis protein family Pig-F

    3. XM_038489209.1 → XP_038345137.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X3

      Conserved Domains (1) summary
      pfam06699
      Location:21 → 145
      PIG-F; GPI biosynthesis protein family Pig-F

    4. XM_038489207.1 → XP_038345135.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X2

      Conserved Domains (1) summary
      pfam06699
      Location:21 → 145
      PIG-F; GPI biosynthesis protein family Pig-F

    Alternate UNSW_CanFamBas_1.0

    Genomic

    1. NC_049751.1 Alternate UNSW_CanFamBas_1.0

      Range
      49673490..49709226 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038615106.1 → XP_038471034.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X1

      Conserved Domains (1) summary
      pfam06699
      Location:21 → 204
      PIG-F; GPI biosynthesis protein family Pig-F

    2. XM_038615107.1 → XP_038471035.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X1

      Conserved Domains (1) summary
      pfam06699
      Location:21 → 204
      PIG-F; GPI biosynthesis protein family Pig-F

    3. XM_038615109.1 → XP_038471037.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X3

      Conserved Domains (1) summary
      pfam06699
      Location:21 → 145
      PIG-F; GPI biosynthesis protein family Pig-F

    4. XM_038615108.1 → XP_038471036.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X2

      Conserved Domains (1) summary
      pfam06699
      Location:21 → 145
      PIG-F; GPI biosynthesis protein family Pig-F

    Alternate UU_Cfam_GSD_1.0

    Genomic

    1. NC_049231.1 Alternate UU_Cfam_GSD_1.0

      Range
      49856593..49892361 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_038551207.1 → XP_038407135.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X1

      UniProtKB/TrEMBL
      A0A8C0LP71, A0A8C0S322, A0A8C0YSP8, A0A8I3PUP6, A0A8I3Q380
      Conserved Domains (1) summary
      pfam06699
      Location:21 → 204
      PIG-F; GPI biosynthesis protein family Pig-F

    2. XM_038551208.1 → XP_038407136.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X1

      UniProtKB/TrEMBL
      A0A8C0LP71, A0A8C0S322, A0A8C0YSP8, A0A8I3PUP6, A0A8I3Q380
      Conserved Domains (1) summary
      pfam06699
      Location:21 → 204
      PIG-F; GPI biosynthesis protein family Pig-F

    3. XM_038551210.1 → XP_038407138.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X3

      Conserved Domains (1) summary
      pfam06699
      Location:21 → 145
      PIG-F; GPI biosynthesis protein family Pig-F

    4. XM_038551209.1 → XP_038407137.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X2

      Conserved Domains (1) summary
      pfam06699
      Location:21 → 145
      PIG-F; GPI biosynthesis protein family Pig-F

    Alternate Dog10K_Boxer_Tasha Primary Assembly

    Genomic

    1. NC_006592.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

      Range
      48658441..48694179 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_531809.7 → XP_531809.2  phosphatidylinositol-glycan biosynthesis class F protein isoform X1

      See identical proteins and their annotated locations for XP_531809.2

      UniProtKB/TrEMBL
      A0A8C0LP71, A0A8C0S322, A0A8C0YSP8, A0A8I3PUP6, A0A8I3Q380
      Conserved Domains (1) summary
      pfam06699
      Location:21 → 204
      PIG-F; GPI biosynthesis protein family Pig-F

    2. XM_005626081.4 → XP_005626138.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X1

      See identical proteins and their annotated locations for XP_005626138.1

      UniProtKB/TrEMBL
      A0A8C0LP71, A0A8C0S322, A0A8C0YSP8, A0A8I3PUP6, A0A8I3Q380
      Conserved Domains (1) summary
      pfam06699
      Location:21 → 204
      PIG-F; GPI biosynthesis protein family Pig-F

    3. XM_022424683.1 → XP_022280391.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X3

      Conserved Domains (1) summary
      pfam06699
      Location:21 → 145
      PIG-F; GPI biosynthesis protein family Pig-F

    4. XM_005626082.4 → XP_005626139.1  phosphatidylinositol-glycan biosynthesis class F protein isoform X2

      Conserved Domains (1) summary
      pfam06699
      Location:21 → 145
      PIG-F; GPI biosynthesis protein family Pig-F
    Nucleotide Protein
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