U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    OGG1 8-oxoguanine DNA glycosylase [ Gallus gallus (chicken) ]

    Gene ID: 771001, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Symbol
    OGG1provided by CGNC
    Full Name
    8-oxoguanine DNA glycosylaseprovided by CGNC
    Primary source
    CGNC:5021
    See related
    Ensembl:ENSGALG00010021546
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See OGG1 in Genome Data Viewer
    Location:
    chromosome: 12
    Exon count:
    8
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 12 NC_052543.1 (11656777..11658743)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 12 NC_052584.1 (11684983..11686949)

    Chromosome 12 - NC_052543.1Genomic Context describing neighboring genes Neighboring gene copine family member 9 Neighboring gene bromodomain and PHD finger containing 1 Neighboring gene calcium/calmodulin dependent protein kinase I Neighboring gene transcriptional adaptor 3 Neighboring gene actin related protein 2/3 complex subunit 4

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    GeneRIFs: Gene References Into Functions

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables 8-oxo-7,8-dihydroguanine DNA N-glycosylase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables damaged DNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in base-excision repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in base-excision repair, AP site formation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in nucleotide-excision repair IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    N-glycosylase/DNA lyase
    NP_001264767.2
    XP_015148627.2
    XP_015148629.2
    XP_046782445.1
    XP_046782446.1

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001277838.2 → NP_001264767.2  N-glycosylase/DNA lyase

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000252
      UniProtKB/TrEMBL
      A0A8V0ZD49
      Related
      ENSGALP00010031213.1, ENSGALT00010052250.1
      Conserved Domains (1) summary
      TIGR00588
      Location:14 → 306
      ogg; 8-oxoguanine DNA-glycosylase (ogg)

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052543.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      11656777..11658743
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015293141.4 → XP_015148627.2  N-glycosylase/DNA lyase isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZD49
      Conserved Domains (1) summary
      TIGR00588
      Location:14 → 306
      ogg; 8-oxoguanine DNA-glycosylase (ogg)

    2. XM_015293143.3 → XP_015148629.2  N-glycosylase/DNA lyase isoform X2

      Conserved Domains (1) summary
      TIGR00588
      Location:14 → 294
      ogg; 8-oxoguanine DNA-glycosylase (ogg)

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052584.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      11684983..11686949
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046926489.1 → XP_046782445.1  N-glycosylase/DNA lyase isoform X1

      UniProtKB/TrEMBL
      A0A8V0ZD49

    2. XM_046926490.1 → XP_046782446.1  N-glycosylase/DNA lyase isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials