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    FAM105A family with sequence similarity 105 member A [ Gallus gallus (chicken) ]

    Gene ID: 769855, updated on 6-Jun-2024

    Summary

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    Symbol
    FAM105Aprovided by CGNC
    Full Name
    family with sequence similarity 105 member Aprovided by CGNC
    Primary source
    CGNC:55588
    See related
    Ensembl:ENSGALG00010000741
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See FAM105A in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (75935154..75959273, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (75939388..75963309, complement)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene ANKH inorganic pyrophosphate transport regulator Neighboring gene uncharacterized LOC107052635 Neighboring gene family with sequence similarity 105, member B Neighboring gene uncharacterized LOC121109614 Neighboring gene uncharacterized LOC121109847

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein linear deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytoplasm IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    inactive ubiquitin thioesterase OTULINL

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001079746.3 → NP_001073214.2  inactive ubiquitin thioesterase OTULINL

      Status: VALIDATED

      Source sequence(s)
      JAENSK010000040
      UniProtKB/TrEMBL
      Q5ZK68
      Conserved Domains (1) summary
      pfam16218
      Location:41 → 308
      Peptidase_C101; Peptidase family C101

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      75935154..75959273 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015282221.4 → XP_015137707.1  inactive ubiquitin thioesterase OTULINL isoform X1

      UniProtKB/TrEMBL
      F1NNA2, Q5ZK68
      Related
      ENSGALP00010000880.1, ENSGALT00010001589.1
      Conserved Domains (1) summary
      pfam16218
      Location:100 → 367
      Peptidase_C101; Peptidase family C101

    2. XM_046926516.1 → XP_046782472.1  inactive ubiquitin thioesterase OTULINL isoform X3

      UniProtKB/TrEMBL
      Q5ZK68

    3. XM_046926509.1 → XP_046782465.1  inactive ubiquitin thioesterase OTULINL isoform X2

      UniProtKB/TrEMBL
      A0A1D5PWB5, Q5ZK68

    4. XM_040686930.2 → XP_040542864.1  inactive ubiquitin thioesterase OTULINL isoform X3

      UniProtKB/TrEMBL
      Q5ZK68
      Conserved Domains (1) summary
      pfam16218
      Location:41 → 308
      Peptidase_C101; Peptidase family C101

    5. XM_046926506.1 → XP_046782462.1  inactive ubiquitin thioesterase OTULINL isoform X2

      UniProtKB/TrEMBL
      A0A1D5PWB5, Q5ZK68

    6. XM_046926512.1 → XP_046782468.1  inactive ubiquitin thioesterase OTULINL isoform X3

      UniProtKB/TrEMBL
      Q5ZK68

    7. XM_015282222.4 → XP_015137708.1  inactive ubiquitin thioesterase OTULINL isoform X2

      UniProtKB/TrEMBL
      A0A1D5PWB5, Q5ZK68
      Related
      ENSGALP00010000878.1, ENSGALT00010001584.1
      Conserved Domains (1) summary
      pfam16218
      Location:74 → 341
      Peptidase_C101; Peptidase family C101

    8. XM_046926510.1 → XP_046782466.1  inactive ubiquitin thioesterase OTULINL isoform X2

      UniProtKB/TrEMBL
      A0A1D5PWB5, Q5ZK68
      Related
      ENSGALP00010000877.1, ENSGALT00010001582.1

    9. XM_015282223.4 → XP_015137709.1  inactive ubiquitin thioesterase OTULINL isoform X2

      UniProtKB/TrEMBL
      A0A1D5PWB5, Q5ZK68
      Conserved Domains (1) summary
      pfam16218
      Location:74 → 341
      Peptidase_C101; Peptidase family C101

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      75939388..75963309 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046911750.1 → XP_046767706.1  inactive ubiquitin thioesterase OTULINL isoform X1

      UniProtKB/TrEMBL
      F1NNA2, Q5ZK68

    2. XM_046911758.1 → XP_046767714.1  inactive ubiquitin thioesterase OTULINL isoform X3

      UniProtKB/TrEMBL
      Q5ZK68

    3. XM_046911754.1 → XP_046767710.1  inactive ubiquitin thioesterase OTULINL isoform X2

      UniProtKB/TrEMBL
      A0A1D5PWB5, Q5ZK68

    4. XM_046911756.1 → XP_046767712.1  inactive ubiquitin thioesterase OTULINL isoform X3

      UniProtKB/TrEMBL
      Q5ZK68

    5. XM_046911752.1 → XP_046767708.1  inactive ubiquitin thioesterase OTULINL isoform X2

      UniProtKB/TrEMBL
      A0A1D5PWB5, Q5ZK68

    6. XM_046911757.1 → XP_046767713.1  inactive ubiquitin thioesterase OTULINL isoform X3

      UniProtKB/TrEMBL
      Q5ZK68

    7. XM_046911751.1 → XP_046767707.1  inactive ubiquitin thioesterase OTULINL isoform X2

      UniProtKB/TrEMBL
      A0A1D5PWB5, Q5ZK68

    8. XM_046911755.1 → XP_046767711.1  inactive ubiquitin thioesterase OTULINL isoform X2

      UniProtKB/TrEMBL
      A0A1D5PWB5, Q5ZK68

    9. XM_046911753.1 → XP_046767709.1  inactive ubiquitin thioesterase OTULINL isoform X2

      UniProtKB/TrEMBL
      A0A1D5PWB5, Q5ZK68
    Nucleotide Protein Strain
    Heading Accession and Version

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