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    CLK2 CDC like kinase 2 [ Gallus gallus (chicken) ]

    Gene ID: 425060, updated on 5-Mar-2024

    Summary

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    Symbol
    CLK2provided by CGNC
    Full Name
    CDC like kinase 2provided by CGNC
    Primary source
    CGNC:52330
    See related
    Ensembl:ENSGALG00010027966
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See CLK2 in Genome Data Viewer
    Location:
    chromosome: 25
    Exon count:
    13
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 25 NC_052556.1 (2098151..2106761, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 25 NC_052597.1 (2231964..2240794, complement)

    Chromosome 25 - NC_052556.1Genomic Context describing neighboring genes Neighboring gene protein FAM189B-like Neighboring gene secretory carrier membrane protein 3 Neighboring gene hyperpolarization activated cyclic nucleotide gated potassium channel 3 Neighboring gene farnesyl diphosphate synthase

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables protein tyrosine kinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein phosphorylation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of RNA splicing IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    dual specificity protein kinase CLK2
    NP_001026497.1
    XP_015154097.1
    XP_024999166.1
    XP_040508260.1
    XP_040508261.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001031326.2 → NP_001026497.1  dual specificity protein kinase CLK2

      See identical proteins and their annotated locations for NP_001026497.1

      Status: PROVISIONAL

      Source sequence(s)
      JAENSK010000352
      UniProtKB/TrEMBL
      Q5ZJ82
      Related
      ENSGALP00010041522.1, ENSGALT00010067779.1
      Conserved Domains (3) summary
      smart00220
      Location:165 → 481
      S_TKc; Serine/Threonine protein kinases, catalytic domain
      pfam08648
      Location:52 → 110
      DUF1777; Protein of unknown function (DUF1777)
      cl21453
      Location:152 → 481
      PKc_like; Protein Kinases, catalytic domain

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052556.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      2098151..2106761 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040652326.1 → XP_040508260.1  dual specificity protein kinase CLK2 isoform X1

      Conserved Domains (1) summary
      cl21453
      Location:153 → 482
      PKc_like; Protein Kinases, catalytic domain

    2. XM_015298611.3 → XP_015154097.1  dual specificity protein kinase CLK2 isoform X1

      Conserved Domains (1) summary
      cl21453
      Location:153 → 482
      PKc_like; Protein Kinases, catalytic domain

    3. XM_040652327.2 → XP_040508261.1  dual specificity protein kinase CLK2 isoform X3

      Conserved Domains (1) summary
      cl21453
      Location:1 → 299
      PKc_like; Protein Kinases, catalytic domain

    4. XM_025143398.2 → XP_024999166.1  dual specificity protein kinase CLK2 isoform X2

      Conserved Domains (1) summary
      cl21453
      Location:153 → 442
      PKc_like; Protein Kinases, catalytic domain

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052597.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      2231964..2240794 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)
    Nucleotide Protein Strain
    Heading Accession and Version

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