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    ESYT2 extended synaptotagmin 2 [ Gallus gallus (chicken) ]

    Gene ID: 420451, updated on 5-Mar-2024

    Summary

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    Symbol
    ESYT2provided by CGNC
    Full Name
    extended synaptotagmin 2provided by CGNC
    Primary source
    CGNC:4922
    See related
    Ensembl:ENSGALG00010025048
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    FAM62B; NCAPG2
    Orthologs
    human mouse all
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    Genomic context

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    See ESYT2 in Genome Data Viewer
    Location:
    chromosome: 2
    Exon count:
    25
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 2 NC_052533.1 (9471785..9541912, complement)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 2 NC_052574.1 (9497206..9567407, complement)

    Chromosome 2 - NC_052533.1Genomic Context describing neighboring genes Neighboring gene non-SMC condensin II complex subunit G2 Neighboring gene uncharacterized LOC112531907 Neighboring gene WD repeat domain 60 Neighboring gene vasoactive intestinal peptide receptor 2

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables lipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in endoplasmic reticulum-plasma membrane tethering IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in lipid transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    extended synaptotagmin-2
    Names
    condensin-2 complex subunit G2
    family with sequence similarity 62 (C2 domain containing) member B
    non-SMC condensin II complex, subunit G2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052533.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      9471785..9541912 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_015282152.3 → XP_015137638.1  extended synaptotagmin-2 isoform X4

      UniProtKB/TrEMBL
      F1NW17
      Related
      ENSGALP00010037853.1, ENSGALT00010061183.1
      Conserved Domains (4) summary
      cd04030
      Location:723 → 848
      C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
      cd04050
      Location:469 → 574
      C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
      cd08391
      Location:317 → 437
      C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
      pfam17047
      Location:123 → 302
      SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain

    2. XM_015282151.3 → XP_015137637.1  extended synaptotagmin-2 isoform X3

      UniProtKB/TrEMBL
      A0A1D5P2W2
      Related
      ENSGALP00010037850.1, ENSGALT00010061180.1
      Conserved Domains (4) summary
      cd04030
      Location:744 → 869
      C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
      cd04050
      Location:469 → 595
      C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
      cd08391
      Location:317 → 437
      C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
      pfam17047
      Location:123 → 302
      SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain

    3. XM_015282150.3 → XP_015137636.1  extended synaptotagmin-2 isoform X2

      UniProtKB/TrEMBL
      A0A3Q3AYW8
      Related
      ENSGALP00010037848.1, ENSGALT00010061177.1
      Conserved Domains (4) summary
      cd04030
      Location:757 → 882
      C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
      cd04050
      Location:469 → 608
      C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
      cd08391
      Location:317 → 437
      C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
      pfam17047
      Location:123 → 302
      SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain

    4. XM_015282149.3 → XP_015137635.1  extended synaptotagmin-2 isoform X1

      UniProtKB/TrEMBL
      A0A8V1A5Y4
      Related
      ENSGALP00010037841.1, ENSGALT00010061166.1
      Conserved Domains (4) summary
      cd04030
      Location:778 → 903
      C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
      cd04050
      Location:469 → 629
      C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
      cd08391
      Location:317 → 437
      C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
      pfam17047
      Location:123 → 302
      SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain

    5. XM_046936243.1 → XP_046792199.1  extended synaptotagmin-2 isoform X5

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052574.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      9497206..9567407 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040663925.2 → XP_040519859.1  extended synaptotagmin-2 isoform X4

      UniProtKB/TrEMBL
      F1NW17
      Conserved Domains (4) summary
      cd04030
      Location:723 → 848
      C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
      cd04050
      Location:469 → 574
      C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
      cd08391
      Location:317 → 437
      C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
      pfam17047
      Location:123 → 302
      SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain

    2. XM_040663924.2 → XP_040519858.1  extended synaptotagmin-2 isoform X3

      UniProtKB/TrEMBL
      A0A1D5P2W2
      Conserved Domains (4) summary
      cd04030
      Location:744 → 869
      C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
      cd04050
      Location:469 → 595
      C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
      cd08391
      Location:317 → 437
      C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
      pfam17047
      Location:123 → 302
      SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain

    3. XM_040663923.2 → XP_040519857.1  extended synaptotagmin-2 isoform X2

      UniProtKB/TrEMBL
      A0A3Q3AYW8
      Conserved Domains (4) summary
      cd04030
      Location:757 → 882
      C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
      cd04050
      Location:469 → 608
      C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
      cd08391
      Location:317 → 437
      C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
      pfam17047
      Location:123 → 302
      SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain

    4. XM_040663922.2 → XP_040519856.1  extended synaptotagmin-2 isoform X1

      UniProtKB/TrEMBL
      A0A8V1A5Y4
      Conserved Domains (4) summary
      cd04030
      Location:778 → 903
      C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
      cd04050
      Location:469 → 629
      C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
      cd08391
      Location:317 → 437
      C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
      pfam17047
      Location:123 → 302
      SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain

    5. XM_046912222.1 → XP_046768178.1  extended synaptotagmin-2 isoform X5

    Suppressed Reference Sequence(s)

    The following Reference Sequences have been suppressed. Explain

    1. NM_001030968.1: Suppressed sequence

      Description
      NM_001030968.1: This RefSeq was suppressed temporarily based on the calculation that the annotated protein was shorter than a protein or proteins from a putative ortholog.
    Nucleotide Protein Strain
    Heading Accession and Version

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