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    MRPS9 mitochondrial ribosomal protein S9 [ Gallus gallus (chicken) ]

    Gene ID: 418723, updated on 6-Jun-2024

    Summary

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    Symbol
    MRPS9provided by CGNC
    Full Name
    mitochondrial ribosomal protein S9provided by CGNC
    Primary source
    CGNC:12597
    See related
    Ensembl:ENSGALG00010013196
    Gene type
    protein coding
    RefSeq status
    VALIDATED
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    See MRPS9 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    12
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (135151771..135183606)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (135108346..135140290)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC107051973 Neighboring gene basic salivary proline-rich protein 4-like Neighboring gene POU class 3 homeobox 3 Neighboring gene uncharacterized LOC121108989 Neighboring gene transforming growth factor beta receptor associated protein 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A large database of chicken bursal ESTs as a resource for the analysis of vertebrate gene function. Abdrakhmanov I, et al. Genome Res, 2000 Dec. PMID 11116100, Free PMC Article
    2. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables RNA binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of mitochondrial small ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    small ribosomal subunit protein uS9m; 28S ribosomal protein S9, mitochondrial

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001277757.2 → NP_001264686.1  small ribosomal subunit protein uS9m isoform 1

      Status: VALIDATED

      Description
      Transcript Variant: This variant (1) represents the longer transcript and encodes the longer isoform (1).
      Source sequence(s)
      JAENSK010000025
      UniProtKB/TrEMBL
      A0A8V0YCL8, A0A8V0YCQ0
      Related
      ENSGALP00010018576.1, ENSGALT00010031729.1
      Conserved Domains (1) summary
      pfam00380
      Location:257 → 377
      Ribosomal_S9; Ribosomal protein S9/S16

    2. NM_001277758.2 → NP_001264687.1  small ribosomal subunit protein uS9m isoform 2

      Status: VALIDATED

      Description
      Transcript Variant: This variant (2) lacks an alternate in-frame segment compared to variant 1. The resulting isoform (2) has the same N- and C-termini but is shorter compared to isoform 1.
      Source sequence(s)
      JAENSK010000025
      UniProtKB/TrEMBL
      A0A1D5P607, A0A8V0YCL8
      Related
      ENSGALP00010018574.1, ENSGALT00010031727.1
      Conserved Domains (1) summary
      pfam00380
      Location:220 → 340
      Ribosomal_S9; Ribosomal protein S9/S16

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      135151771..135183606
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040699180.2 → XP_040555114.1  28S ribosomal protein S9, mitochondrial isoform X3

      UniProtKB/TrEMBL
      A0A8V0YCL8
      Conserved Domains (1) summary
      pfam00380
      Location:185 → 305
      Ribosomal_S9; Ribosomal protein S9/S16

    2. XM_046941013.1 → XP_046796969.1  28S ribosomal protein S9, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A8V0YCL8, A0A8V0YCP3
      Related
      ENSGALP00010018571.1, ENSGALT00010031723.1

    3. XM_046941023.1 → XP_046796979.1  28S ribosomal protein S9, mitochondrial isoform X2

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      135108346..135140290
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_046908070.1 → XP_046764026.1  28S ribosomal protein S9, mitochondrial isoform X3

      UniProtKB/TrEMBL
      A0A8V0YCL8

    2. XM_046908068.1 → XP_046764024.1  28S ribosomal protein S9, mitochondrial isoform X1

      UniProtKB/TrEMBL
      A0A8V0YCL8, A0A8V0YCP3

    3. XM_046908069.1 → XP_046764025.1  28S ribosomal protein S9, mitochondrial isoform X2

    Nucleotide Protein Strain
    Heading Accession and Version

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