U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination
    • Showing Current items.

    USP41 ubiquitin specific peptidase 41 [ Gallus gallus (chicken) ]

    Gene ID: 418167, updated on 5-Mar-2024

    Summary

    Go to the top of the page Help
    Official Symbol
    USP41provided by CGNC
    Official Full Name
    ubiquitin specific peptidase 41provided by CGNC
    Primary source
    CGNC:50688
    See related
    Ensembl:ENSGALG00010012633
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Also known as
    USP18
    Orthologs
    human mouse all
    NEW
    Try the new Gene table
    Try the new Transcript table

    Genomic context

    Go to the top of the page Help
    See USP41 in Genome Data Viewer
    Location:
    chromosome: 1
    Exon count:
    11
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (62128809..62142748)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (62450585..62464531)

    Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene tubulin alpha 8B Neighboring gene tubulin alpha 8A Neighboring gene uncharacterized LOC107053357 Neighboring gene uncharacterized LOC107053352 Neighboring gene aldo-keto reductase family 1, member B10 (aldose reductase)

    Genomic regions, transcripts, and products

    Go to the top of the page Help

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

    Go to the top of the pageHelp

    Related articles in PubMed

    1. Replication of a low-pathogenic avian influenza virus is enhanced by chicken ubiquitin-specific protease 18. Tanikawa T, et al. J Gen Virol, 2017 Sep. PMID 28825532

    GeneRIFs: Gene References Into Functions

    What's a GeneRIF?
    1. USP18 significantly enhanced the replication of a low-pathogenic avian influenza virus.
      Title: Replication of a low-pathogenic avian influenza virus is enhanced by chicken ubiquitin-specific protease 18.
    Submit: New GeneRIF Correction

    General gene information

    Go to the top of the page Help

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables cysteine-type deubiquitinase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables cysteine-type endopeptidase activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in protein deubiquitination IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in cytosol IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

    Go to the top of the page Help
    Preferred Names
    ubl carboxyl-terminal hydrolase 18
    Names
    ubiquitin specific peptidase 18
    ubiquitin specific protease 18
    XP_004938015.2
    XP_040514273.1
    XP_040514274.1
    XP_416398.4

    NCBI Reference Sequences (RefSeq)

    Go to the top of the page Help

    NEW Try the new Transcript table

    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      62128809..62142748
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004937958.5 → XP_004938015.2  ubl carboxyl-terminal hydrolase 18 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YN52
      Related
      ENSGALP00010017549.1, ENSGALT00010030245.1
      Conserved Domains (1) summary
      cd02257
      Location:109 → 422
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...

    2. XM_416398.7 → XP_416398.4  ubl carboxyl-terminal hydrolase 18 isoform X2

      UniProtKB/TrEMBL
      A0A8V0YA03, A0A8V0YGA8
      Related
      ENSGALP00010017553.1, ENSGALT00010030256.1
      Conserved Domains (1) summary
      cd02257
      Location:61 → 374
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      62450585..62464531
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040658339.2 → XP_040514273.1  ubl carboxyl-terminal hydrolase 18 isoform X1

      UniProtKB/TrEMBL
      A0A8V0YN52
      Conserved Domains (1) summary
      cd02257
      Location:109 → 422
      Peptidase_C19; Peptidase C19 contains ubiquitinyl hydrolases. They are intracellular peptidases that remove ubiquitin molecules from polyubiquinated peptides by cleavage of isopeptide bonds. They hydrolyse bonds involving the carboxyl group of the C-terminal Gly ...

    2. XM_040658340.2 → XP_040514274.1  ubl carboxyl-terminal hydrolase 18 isoform X2

      UniProtKB/TrEMBL
      A0A224AW78, A0A8V0YGA8
      Conserved Domains (1) summary
      pfam00443
      Location:60 → 373
      UCH; Ubiquitin carboxyl-terminal hydrolase
    Nucleotide Protein Strain
    Heading Accession and Version

    Gene LinkOut

    The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

    Molecular Biology Databases
    Research Materials
    Miscellaneous