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    RPL31 ribosomal protein L31 [ Bos taurus (cattle) ]

    Gene ID: 534279, updated on 5-Mar-2024

    Summary

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    Gene symbol
    RPL31
    Gene description
    ribosomal protein L31
    See related
    BGD:BT12698
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Bos taurus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
    Orthologs
    human mouse all
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    Genomic context

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    See RPL31 in Genome Data Viewer
    Location:
    chromosome: 11
    Exon count:
    5
    Annotation release Status Assembly Chr Location
    RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 11 NC_037338.1 (5972220..5977576)

    Chromosome 11 - NC_037338.1Genomic Context describing neighboring genes Neighboring gene transfer RNA arginine (anticodon ACG) Neighboring gene phosducin like 3 Neighboring gene neuronal PAS domain protein 2 Neighboring gene dynein light chain 1, cytoplasmic-like Neighboring gene TBC1 domain family member 8 Neighboring gene CCR4-NOT transcription complex subunit 11 Neighboring gene ring finger protein 149

    Genomic regions, transcripts, and products

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    Genomic Sequence:
    NC_037338.1 Chromosome 11 Reference ARS-UCD2.0 Primary Assembly

    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    Related articles in PubMed

    1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article
    2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article

    GeneRIFs: Gene References Into Functions

    Pathways from PubChem

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    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables structural constituent of ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cytoplasmic translation IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    part_of cytosolic large ribosomal subunit IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in ribosome IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    large ribosomal subunit protein eL31
    Names
    60S ribosomal protein L31

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_001025341.3 → NP_001020512.1  large ribosomal subunit protein eL31

      See identical proteins and their annotated locations for NP_001020512.1

      Status: PROVISIONAL

      Source sequence(s)
      BC102125
      UniProtKB/Swiss-Prot
      Q56JX3
      Conserved Domains (1) summary
      pfam01198
      Location:19 → 100
      Ribosomal_L31e; Ribosomal protein L31e

    RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference ARS-UCD2.0 Primary Assembly

    Genomic

    1. NC_037338.1 Reference ARS-UCD2.0 Primary Assembly

      Range
      5972220..5977576
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_005212331.4 → XP_005212388.1  large ribosomal subunit protein eL31 isoform X1

      See identical proteins and their annotated locations for XP_005212388.1

      UniProtKB/Swiss-Prot
      Q56JX3
      Conserved Domains (1) summary
      pfam01198
      Location:19 → 100
      Ribosomal_L31e; Ribosomal protein L31e

    2. XM_024998849.2 → XP_024854617.1  large ribosomal subunit protein eL31 isoform X1

      UniProtKB/Swiss-Prot
      Q56JX3
      Conserved Domains (1) summary
      pfam01198
      Location:19 → 100
      Ribosomal_L31e; Ribosomal protein L31e
    Nucleotide Protein Strain
    Heading Accession and Version
    Protein Accession Links
    GenPept Link UniProtKB Link
    Q56JX3.1 GenPept UniProtKB/Swiss-Prot:Q56JX3

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