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    rsl24d1 ribosomal L24 domain containing 1 [ Danio rerio (zebrafish) ]

    Gene ID: 406266, updated on 27-Mar-2024

    Summary

    Official Symbol
    rsl24d1provided by ZNC
    Official Full Name
    ribosomal L24 domain containing 1provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-040426-1925
    See related
    Ensembl:ENSDARG00000040439 AllianceGenome:ZFIN:ZDB-GENE-040426-1925
    Gene type
    protein coding
    RefSeq status
    PROVISIONAL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Also known as
    c15orf15; zgc:56202; wu:fa94f12; wu:fa95d02
    Summary
    Predicted to be involved in ribosomal large subunit biogenesis. Predicted to act upstream of or within ribosome biogenesis. Predicted to be located in nucleus. Predicted to be active in nucleolus. Is expressed in nervous system and somite. Orthologous to human RSL24D1 (ribosomal L24 domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]
    Orthologs
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    Genomic context

    Location:
    chromosome: 25
    Exon count:
    6
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 25 NC_007136.7 (469855..475217)
    105 previous assembly GRCz10 (GCF_000002035.5) 25 NC_007136.6 (446958..452320)

    Chromosome 25 - NC_007136.7Genomic Context describing neighboring genes Neighboring gene DNA-binding protein RFX7-like Neighboring gene sizzled Neighboring gene protogenin homolog b (Gallus gallus) Neighboring gene PML-like exon 9.1 Neighboring gene myosin IXAb

    Genomic regions, transcripts, and products

    Expression

    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    General gene information

    Markers

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    involved_in ribosomal large subunit biogenesis IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    acts_upstream_of_or_within ribosome biogenesis IEA
    Inferred from Electronic Annotation
    more info
     
    Component Evidence Code Pubs
    is_active_in nucleolus IBA
    Inferred from Biological aspect of Ancestor
    more info
     
    located_in nucleus IEA
    Inferred from Electronic Annotation
    more info
     

    General protein information

    Preferred Names
    probable ribosome biogenesis protein RLP24
    Names
    ribosomal L24 domain-containing protein 1
    NP_998158.1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs maintained independently of Annotated Genomes

    These reference sequences exist independently of genome builds. Explain

    These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

    mRNA and Protein(s)

    1. NM_212993.1NP_998158.1  probable ribosome biogenesis protein RLP24

      See identical proteins and their annotated locations for NP_998158.1

      Status: PROVISIONAL

      Source sequence(s)
      BC051780
      UniProtKB/Swiss-Prot
      Q7ZTZ2
      Related
      ENSDARP00000095488.2, ENSDART00000104717.4
      Conserved Domains (1) summary
      pfam01246
      Location:264
      Ribosomal_L24e; Ribosomal protein L24e

    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007136.7 Reference GRCz11 Primary Assembly

      Range
      469855..475217
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)