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Rsl24d1 ribosomal L24 domain containing 1 [ Mus musculus (house mouse) ]

Gene ID: 225215, updated on 29-Jan-2023

Summary

Official Symbol
Rsl24d1provided by MGI
Official Full Name
ribosomal L24 domain containing 1provided by MGI
Primary source
MGI:MGI:2681840
See related
Ensembl:ENSMUSG00000032215 AllianceGenome:MGI:2681840
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Mus musculus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus
Also known as
2410159K22Rik
Summary
Predicted to be a structural constituent of ribosome. Predicted to be involved in ribosomal large subunit biogenesis. Predicted to act upstream of or within ribosome biogenesis. Predicted to be located in nucleoplasm. Predicted to be active in nucleolus. Orthologous to human RSL24D1 (ribosomal L24 domain containing 1). [provided by Alliance of Genome Resources, Apr 2022]
Expression
Ubiquitous expression in CNS E11.5 (RPKM 36.0), CNS E18 (RPKM 21.4) and 25 other tissues See more
Orthologs
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Genomic context

See Rsl24d1 in Genome Data Viewer
Location:
9; 9 D
Exon count:
6
Annotation release Status Assembly Chr Location
109 current GRCm39 (GCF_000001635.27) 9 NC_000075.7 (73020751..73030615)
108.20200622 previous assembly GRCm38.p6 (GCF_000001635.26) 9 NC_000075.6 (73113469..73123333)

Chromosome 9 - NC_000075.7Genomic Context describing neighboring genes Neighboring gene RAB27A, member RAS oncogene family Neighboring gene KH domain containing 3, subcortical maternal complex member Neighboring gene ribosomal protein L36 pseudogene Neighboring gene predicted gene 27211

Genomic regions, transcripts, and products

Expression

  • Project title: Mouse ENCODE transcriptome data
  • Description: RNA profiling data sets generated by the Mouse ENCODE project.
  • BioProject: PRJNA66167
  • Publication: PMID 25409824
  • Analysis date: n/a

Variation

Alleles

Alleles of this type are documented at Mouse Genome Informatics  (MGI)
  • Endonuclease-mediated (1) 

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Homology

Clone Names

  • MGC6735

Gene Ontology Provided by MGI

Function Evidence Code Pubs
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 
Process Evidence Code Pubs
involved_in ribosomal large subunit biogenesis IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
acts_upstream_of_or_within ribosome biogenesis IEA
Inferred from Electronic Annotation
more info
 
involved_in translation IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in nucleolus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
located_in nucleolus ISO
Inferred from Sequence Orthology
more info
 
located_in nucleoplasm ISO
Inferred from Sequence Orthology
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
probable ribosome biogenesis protein RLP24
Names
60S ribosomal protein L30 isolog
ribosomal L24 domain-containing protein 1
NP_941011.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_198609.2NP_941011.1  probable ribosome biogenesis protein RLP24

    See identical proteins and their annotated locations for NP_941011.1

    Status: PROVISIONAL

    Source sequence(s)
    AC157513
    Consensus CDS
    CCDS40688.1
    UniProtKB/Swiss-Prot
    Q99L28
    UniProtKB/TrEMBL
    A0A6P5QES6, A0A8C6IIC3, Q5EBK7
    Related
    ENSMUSP00000034738.8, ENSMUST00000034738.14
    Conserved Domains (1) summary
    pfam01246
    Location:266
    Ribosomal_L24e; Ribosomal protein L24e

RefSeqs of Annotated Genomes: Mus musculus Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCm39 C57BL/6J

Genomic

  1. NC_000075.7 Reference GRCm39 C57BL/6J

    Range
    73020751..73030615
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)