CALM1 calmodulin 1 (phosphorylase kinase, delta) [Gallus gallus (chicken)] - Gene

Summary

Symbol: CALM1provided by CGNC
Full Name: calmodulin 1 (phosphorylase kinase, delta)provided by CGNC
Primary source: CGNC:49852
See related: Ensembl:ENSGALG00010017643
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 5

Exon count:: 6

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	5	NC_052536.1 (43383652..43394434)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	5	NC_052577.1 (43347266..43358035)

Chromosome 5 - NC_052536.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

A denitrase activity is identified in macrophages that is upregulated following macrophage activation, which is shown by mass spectrometry to recognize nitrotyrosines in the calcium signaling protein calmodulin (CaM).
Title: Identification of a denitrase activity against calmodulin in activated macrophages using high-field liquid chromatography--FTICR mass spectrometry.
The presence of multiple conformations is a physical property of calmodulin (CaM), and it is likely that the heterogeneity of structure is at least partially responsible for the promiscuous ability of CaM to recognize diverse targets.
Title: Conformational substates of calmodulin revealed by single-pair fluorescence resonance energy transfer: influence of solution conditions and oxidative modification.

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Interactions

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Products	Interactant	Other Gene	Complex	Source	Pubs	Description

General gene information

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Markers

MARC_31597-31598:1045758070:1 (e-PCR)
- UniSTS:269204

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables calcium ion binding	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: neo-calmodulin

Names: calmodulin-like protein (neoCaM); neoCaM

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001110364.2 → NP_001103834.2 neo-calmodulin

Status: PROVISIONAL

Source sequence(s)

JAENSK010000215

UniProtKB/Swiss-Prot

P62149, Q5ZIQ6

UniProtKB/TrEMBL

O93410

Related

ENSGALP00010025124.1, ENSGALT00010042634.1

Conserved Domains (1) summary

PTZ00184
Location:1 → 149

PTZ00184; calmodulin; Provisional