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    Pecam1 platelet and endothelial cell adhesion molecule 1 [ Cricetulus griseus (Chinese hamster) ]

    Gene ID: 100774872, updated on 8-Mar-2024

    Summary

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    Gene symbol
    Pecam1
    Gene description
    platelet and endothelial cell adhesion molecule 1
    Locus tag
    I79_008304
    See related
    Ensembl:ENSCGRG00015021528
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Cricetulus griseus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Cricetidae; Cricetinae; Cricetulus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 7
    Exon count:
    16
    Annotation release Status Assembly Chr Location
    104 current CriGri_1.0 (GCF_000223135.1) Unplaced Scaffold NW_003613864.1 (1272976..1350279)
    104 current CriGri-PICRH-1.0 (GCF_003668045.3) 7 NC_048600.1 (119598591..119676156, complement)

    NW_003613864.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L35a-like Neighboring gene mast cell immunoglobulin like receptor 1 Neighboring gene testis expressed 2 Neighboring gene small nucleolar RNA snR60/Z15/Z230/Z193/J17 Neighboring gene uncharacterized LOC103162387 Neighboring gene small nucleolar RNA SNORA76

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Markers

    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables transmembrane signaling receptor activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in cell surface receptor signaling pathway IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cell-cell adhesion via plasma-membrane adhesion molecules IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    platelet endothelial cell adhesion molecule
    Names
    Platelet endothelial cell adhesion molecule
    platelet/endothelial cell adhesion molecule 1

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Cricetulus griseus Annotation Release 104 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference CriGri_1.0 Primary Assembly

    Genomic

    1. NW_003613864.1 Reference CriGri_1.0 Primary Assembly

      Range
      1272976..1350279
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_016975317.3 → XP_016830806.1  platelet endothelial cell adhesion molecule isoform X2

      UniProtKB/TrEMBL
      A0A8C2MLY9, A0A9J7GER8
      Conserved Domains (5) summary
      smart00410
      Location:43 → 127
      IG_like; Immunoglobulin like
      pfam07679
      Location:235 → 315
      I-set; Immunoglobulin I-set domain
      pfam13895
      Location:327 → 403
      Ig_2; Immunoglobulin domain
      pfam13927
      Location:506 → 575
      Ig_3; Immunoglobulin domain
      cl11960
      Location:43 → 127
      Ig; Immunoglobulin domain

    2. XM_016975318.3 → XP_016830807.1  platelet endothelial cell adhesion molecule isoform X3

      UniProtKB/TrEMBL
      A0A8C2MLY9, A0A9J7JW60
      Conserved Domains (5) summary
      smart00410
      Location:43 → 127
      IG_like; Immunoglobulin like
      pfam07679
      Location:235 → 315
      I-set; Immunoglobulin I-set domain
      pfam13895
      Location:327 → 403
      Ig_2; Immunoglobulin domain
      pfam13927
      Location:506 → 575
      Ig_3; Immunoglobulin domain
      cl11960
      Location:43 → 127
      Ig; Immunoglobulin domain

    3. XM_007642516.4 → XP_007640706.1  platelet endothelial cell adhesion molecule isoform X1

      See identical proteins and their annotated locations for XP_007640706.1

      UniProtKB/TrEMBL
      A0A8C2MRE2, A0A9J7GJ73
      Conserved Domains (4) summary
      smart00410
      Location:43 → 127
      IG_like; Immunoglobulin like
      pfam13895
      Location:327 → 403
      Ig_2; Immunoglobulin domain
      pfam13927
      Location:506 → 575
      Ig_3; Immunoglobulin domain
      cl11960
      Location:43 → 127
      Ig; Immunoglobulin domain

    RNA

    1. XR_001726555.3 RNA Sequence

    Alternate CriGri-PICRH-1.0

    Genomic

    1. NC_048600.1 Alternate CriGri-PICRH-1.0

      Range
      119598591..119676156 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_027427807.2 → XP_027283608.1  platelet endothelial cell adhesion molecule isoform X3

      UniProtKB/TrEMBL
      A0A8C2MLY9, A0A9J7JW60
      Related
      ENSCGRP00015029091.2, ENSCGRT00015035610.2

    2. XM_027427804.2 → XP_027283605.1  platelet endothelial cell adhesion molecule isoform X1

      UniProtKB/TrEMBL
      A0A8C2MRE2, A0A9J7GJ73
      Related
      ENSCGRP00015029010.1, ENSCGRT00015035519.2

    3. XM_027427805.2 → XP_027283606.1  platelet endothelial cell adhesion molecule isoform X2

      UniProtKB/TrEMBL
      A0A8C2MLY9, A0A9J7GER8
      Related
      ENSCGRP00015029086.2, ENSCGRT00015035601.2

    RNA

    1. XR_003487405.2 RNA Sequence

    Nucleotide Protein Strain
    Heading Accession and Version

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