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    ATP2B2 ATPase plasma membrane Ca2+ transporting 2 [ Sus scrofa (pig) ]

    Gene ID: 100625418, updated on 17-Aug-2024

    Summary

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    Official Symbol
    ATP2B2provided by VGNC
    Official Full Name
    ATPase plasma membrane Ca2+ transporting 2provided by VGNC
    Primary source
    VGNC:VGNC:85649
    See related
    Ensembl:ENSSSCG00000023084
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Sus scrofa
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
    Expression
    Biased expression in liver (RPKM 3.8), mixtures (RPKM 3.7) and 4 other tissues See more
    Orthologs
    human mouse all
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    Genomic context

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    See ATP2B2 in Genome Data Viewer
    Location:
    chromosome: 13
    Exon count:
    31
    Annotation release Status Assembly Chr Location
    106 current Sscrofa11.1 (GCF_000003025.6) 13 NC_010455.5 (66526508..66897125, complement)
    105 previous assembly Sscrofa10.2 (GCF_000003025.5) Unplaced Scaffold NW_003613098.1 (9017..106650, complement)

    Chromosome 13 - NC_010455.5Genomic Context describing neighboring genes Neighboring gene ghrelin and obestatin prepropeptide Neighboring gene SEC13 homolog, nuclear pore and COPII coat complex component Neighboring gene microRNA mir-885 Neighboring gene solute carrier family 6 member 11 Neighboring gene solute carrier family 6 member 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Transcriptome data used for gene annotation Transcriptome data used for gene annotation
    • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
    • BioProject: PRJNA311523
    • Publication: PMID 27646534
    • Analysis date: Thu Dec 14 17:10:49 2017

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables ATP binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables ATP hydrolysis activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables P-type calcium transporter activity IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables PDZ domain binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium ion transmembrane transport IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of cytosolic calcium ion concentration IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in intracellular membrane-bounded organelle IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in postsynaptic density membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    plasma membrane calcium-transporting ATPase 2
    Names
    ATPase, Ca++ transporting, plasma membrane 2

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference Sscrofa11.1 Primary Assembly

    Genomic

    1. NC_010455.5 Reference Sscrofa11.1 Primary Assembly

      Range
      66526508..66897125 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_021069335.1 → XP_020924994.1  plasma membrane calcium-transporting ATPase 2 isoform X5

      UniProtKB/TrEMBL
      A0A286ZVU9, A0A8D0SKM7, A0A8D1F5M1
      Related
      ENSSSCP00000035789.2, ENSSSCT00000044254.3
      Conserved Domains (2) summary
      pfam12424
      Location:1095 → 1135
      ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
      cl27747
      Location:12 → 1056
      E1-E2_ATPase; E1-E2 ATPase

    2. XM_021069331.1 → XP_020924990.1  plasma membrane calcium-transporting ATPase 2 isoform X3

      UniProtKB/TrEMBL
      A0A480NJD5, A0A8D0LNM0, A0A8D1TXW5
      Conserved Domains (2) summary
      pfam12424
      Location:1126 → 1166
      ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
      cl27747
      Location:12 → 1087
      E1-E2_ATPase; E1-E2 ATPase

    3. XM_021069324.1 → XP_020924983.1  plasma membrane calcium-transporting ATPase 2 isoform X1

      UniProtKB/TrEMBL
      A0A287B705, A0A481AYZ5, A0A8D0J938, A0A8D0N7G3
      Conserved Domains (2) summary
      pfam12424
      Location:1126 → 1172
      ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
      cl27747
      Location:12 → 1087
      E1-E2_ATPase; E1-E2 ATPase

    4. XM_021069321.1 → XP_020924980.1  plasma membrane calcium-transporting ATPase 2 isoform X1

      UniProtKB/TrEMBL
      A0A287B705, A0A481AYZ5, A0A8D0J938, A0A8D0N7G3
      Conserved Domains (2) summary
      pfam12424
      Location:1126 → 1172
      ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
      cl27747
      Location:12 → 1087
      E1-E2_ATPase; E1-E2 ATPase

    5. XM_021069329.1 → XP_020924988.1  plasma membrane calcium-transporting ATPase 2 isoform X2

      UniProtKB/TrEMBL
      A0A286ZSF2, A0A8D0JG36, A0A8D1F571
      Conserved Domains (2) summary
      pfam12424
      Location:1095 → 1141
      ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
      cl27747
      Location:12 → 1056
      E1-E2_ATPase; E1-E2 ATPase

    6. XM_021069323.1 → XP_020924982.1  plasma membrane calcium-transporting ATPase 2 isoform X1

      UniProtKB/TrEMBL
      A0A287B705, A0A481AYZ5, A0A8D0J938, A0A8D0N7G3
      Conserved Domains (2) summary
      pfam12424
      Location:1126 → 1172
      ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
      cl27747
      Location:12 → 1087
      E1-E2_ATPase; E1-E2 ATPase

    7. XM_021069325.1 → XP_020924984.1  plasma membrane calcium-transporting ATPase 2 isoform X1

      UniProtKB/TrEMBL
      A0A287B705, A0A481AYZ5, A0A8D0J938, A0A8D0N7G3
      Conserved Domains (2) summary
      pfam12424
      Location:1126 → 1172
      ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
      cl27747
      Location:12 → 1087
      E1-E2_ATPase; E1-E2 ATPase

    8. XM_021069326.1 → XP_020924985.1  plasma membrane calcium-transporting ATPase 2 isoform X1

      UniProtKB/TrEMBL
      A0A287B705, A0A481AYZ5, A0A8D0J938, A0A8D0N7G3
      Conserved Domains (2) summary
      pfam12424
      Location:1126 → 1172
      ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
      cl27747
      Location:12 → 1087
      E1-E2_ATPase; E1-E2 ATPase

    9. XM_021069322.1 → XP_020924981.1  plasma membrane calcium-transporting ATPase 2 isoform X1

      UniProtKB/TrEMBL
      A0A287B705, A0A481AYZ5, A0A8D0J938, A0A8D0N7G3
      Related
      ENSSSCP00000052302.2, ENSSSCT00000061352.3
      Conserved Domains (2) summary
      pfam12424
      Location:1126 → 1172
      ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
      cl27747
      Location:12 → 1087
      E1-E2_ATPase; E1-E2 ATPase

    10. XM_021069330.1 → XP_020924989.1  plasma membrane calcium-transporting ATPase 2 isoform X2

      UniProtKB/TrEMBL
      A0A286ZSF2, A0A8D0JG36, A0A8D1F571
      Related
      ENSSSCP00000034401.1, ENSSSCT00000056176.3
      Conserved Domains (2) summary
      pfam12424
      Location:1095 → 1141
      ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
      cl27747
      Location:12 → 1056
      E1-E2_ATPase; E1-E2 ATPase

    11. XM_021069328.1 → XP_020924987.1  plasma membrane calcium-transporting ATPase 2 isoform X1

      UniProtKB/TrEMBL
      A0A287B705, A0A481AYZ5, A0A8D0J938, A0A8D0N7G3
      Conserved Domains (2) summary
      pfam12424
      Location:1126 → 1172
      ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
      cl27747
      Location:12 → 1087
      E1-E2_ATPase; E1-E2 ATPase

    12. XM_021069332.1 → XP_020924991.1  plasma membrane calcium-transporting ATPase 2 isoform X3

      UniProtKB/TrEMBL
      A0A480NJD5, A0A8D0LNM0, A0A8D1TXW5
      Related
      ENSSSCP00000036866.2, ENSSSCT00000038542.3
      Conserved Domains (2) summary
      pfam12424
      Location:1126 → 1166
      ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
      cl27747
      Location:12 → 1087
      E1-E2_ATPase; E1-E2 ATPase

    13. XM_021069333.1 → XP_020924992.1  plasma membrane calcium-transporting ATPase 2 isoform X4

      UniProtKB/TrEMBL
      A0A8D0JB14
      Conserved Domains (2) summary
      pfam12424
      Location:1081 → 1127
      ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
      cl27747
      Location:12 → 1042
      E1-E2_ATPase; E1-E2 ATPase

    14. XM_021069334.1 → XP_020924993.1  plasma membrane calcium-transporting ATPase 2 isoform X4

      UniProtKB/TrEMBL
      A0A8D0JB14
      Related
      ENSSSCP00000012333.4, ENSSSCT00000012666.5
      Conserved Domains (2) summary
      pfam12424
      Location:1081 → 1127
      ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
      cl27747
      Location:12 → 1042
      E1-E2_ATPase; E1-E2 ATPase

    15. XM_021069336.1 → XP_020924995.1  plasma membrane calcium-transporting ATPase 2 isoform X6

      UniProtKB/TrEMBL
      A0A8D0JFB2, A0A8D1BNP4, F1S2B2
      Related
      ENSSSCP00000013577.4, ENSSSCT00000013960.4
      Conserved Domains (2) summary
      pfam12424
      Location:1081 → 1121
      ATP_Ca_trans_C; Plasma membrane calcium transporter ATPase C terminal
      cl27747
      Location:12 → 1042
      E1-E2_ATPase; E1-E2 ATPase
    Nucleotide Protein
    Heading Accession and Version

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