CUL5 cullin 5 [Pan troglodytes (chimpanzee)] - Gene

Summary

Official Symbol: CUL5provided by VGNC
Official Full Name: cullin 5provided by VGNC
Primary source: VGNC:VGNC:3137
Locus tag: CK820_G0034458
See related: Ensembl:ENSPTRG00000004246
Gene type: protein coding
RefSeq status: MODEL
Organism: Pan troglodytes
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 11

Exon count:: 19

Annotation release	Status	Assembly	Chr	Location
RS_2024_02	current	NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2)	9	NC_072407.2 (109993688..110090250)
RS_2023_04	previous assembly	NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1)	11	NC_072409.1 (109222380..109321356)

Chromosome 9 - NC_072407.2 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Markers

STS-X81882 (e-PCR)
- UniSTS:22543

RH102471 (e-PCR)
- UniSTS:96805

CUL5_2069 (e-PCR)
- UniSTS:280630

RH102489 (e-PCR)
- UniSTS:96823

STS-AA037842 (e-PCR)
- UniSTS:26971

SHGC-81539 (e-PCR)
- UniSTS:104285

RH68294 (e-PCR)
- UniSTS:52578

SHGC-105141 (e-PCR)
- UniSTS:169197

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein-macromolecule adaptor activity	IEA Inferred from Electronic Annotation more info	PubMed
enables ubiquitin protein ligase binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in SCF-dependent proteasomal ubiquitin-dependent protein catabolic process	IEA Inferred from Electronic Annotation more info	PubMed
involved_in protein ubiquitination	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of Cul5-RING ubiquitin ligase complex	IEA Inferred from Electronic Annotation more info	PubMed
part_of SCF ubiquitin ligase complex	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: cullin-5; LOW QUALITY PROTEIN: cullin-5

Names: Vasopressin-activated calcium-mobilizing receptor-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

NC_072407.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Range

109993688..110090250

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_522173.9 → XP_522173.3 LOW QUALITY PROTEIN: cullin-5

UniProtKB/TrEMBL

A0A2I3SYJ6

Related

ENSPTRP00000007307.4

Conserved Domains (2) summary

pfam00888
Location:96 → 749

Cullin; Cullin family

pfam10557
Location:788 → 848

Cullin_Nedd8; Cullin protein neddylation domain