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    SYT11 synaptotagmin 11 [ Gallus gallus (chicken) ]

    Gene ID: 429166, updated on 5-Mar-2024

    Summary

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    Symbol
    SYT11provided by CGNC
    Full Name
    synaptotagmin 11provided by CGNC
    Primary source
    CGNC:10855
    See related
    Ensembl:ENSGALG00010028445
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Gallus gallus
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
    Orthologs
    human mouse all
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    Genomic context

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    Location:
    chromosome: 25
    Exon count:
    4
    Annotation release Status Assembly Chr Location
    106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 25 NC_052556.1 (2200946..2211439)
    106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 25 NC_052597.1 (2334999..2345493)

    Chromosome 25 - NC_052556.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101750628 Neighboring gene uncharacterized LOC107055145 Neighboring gene death associated protein 3 Neighboring gene misato 1, mitochondrial distribution and morphology regulator Neighboring gene gon-4 like Neighboring gene uncharacterized LOC121107591 Neighboring gene microRNA 1752 Neighboring gene Ras like without CAAX 1 Neighboring gene small Cajal body-specific RNA 4 Neighboring gene KH domain containing 4, pre-mRNA splicing factor

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Bibliography

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    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by RefSeq

    Function Evidence Code Pubs
    enables SNARE binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium ion binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables calcium-dependent phospholipid binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables clathrin binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    enables phosphatidylserine binding IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Process Evidence Code Pubs
    involved_in calcium-ion regulated exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in cellular response to calcium ion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of calcium ion-dependent exocytosis IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in regulation of dopamine secretion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    involved_in vesicle fusion IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    Component Evidence Code Pubs
    located_in axon IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in membrane IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 
    located_in synapse IEA
    Inferred from Electronic Annotation
    more info
    		 PubMed 

    General protein information

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    Preferred Names
    synaptotagmin-11
    Names
    synaptotagmin XI

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Genomic

    1. NC_052556.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

      Range
      2200946..2211439
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_004948288.5 → XP_004948345.2  synaptotagmin-11 isoform X1

      UniProtKB/TrEMBL
      A0A8V1AIM6
      Conserved Domains (2) summary
      cd08388
      Location:157 → 280
      C2A_Synaptotagmin-4-11; C2A domain first repeat present in Synaptotagmins 4 and 11
      cd08404
      Location:291 → 428
      C2B_Synaptotagmin-4; C2 domain second repeat present in Synaptotagmin 4

    2. XM_426721.8 → XP_426721.4  synaptotagmin-11 isoform X2

      UniProtKB/TrEMBL
      A0A8V1A8Q2, A0A8V1AIM6
      Related
      ENSGALP00010042335.1, ENSGALT00010068893.1
      Conserved Domains (2) summary
      cd08388
      Location:157 → 280
      C2A_Synaptotagmin-4-11; C2A domain first repeat present in Synaptotagmins 4 and 11
      cd08404
      Location:291 → 427
      C2B_Synaptotagmin-4; C2 domain second repeat present in Synaptotagmin 4

    Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Genomic

    1. NC_052597.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

      Range
      2334999..2345493
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_040690774.2 → XP_040546708.1  synaptotagmin-11 isoform X1

      UniProtKB/TrEMBL
      A0A8V1AIM6
      Conserved Domains (2) summary
      cd08388
      Location:157 → 280
      C2A_Synaptotagmin-4-11; C2A domain first repeat present in Synaptotagmins 4 and 11
      cd08404
      Location:291 → 428
      C2B_Synaptotagmin-4; C2 domain second repeat present in Synaptotagmin 4

    2. XM_040690775.2 → XP_040546709.1  synaptotagmin-11 isoform X2

      UniProtKB/TrEMBL
      A0A8V1A8Q2, A0A8V1AIM6
      Conserved Domains (2) summary
      cd08388
      Location:157 → 280
      C2A_Synaptotagmin-4-11; C2A domain first repeat present in Synaptotagmins 4 and 11
      cd08404
      Location:291 → 427
      C2B_Synaptotagmin-4; C2 domain second repeat present in Synaptotagmin 4
    Nucleotide Protein
    Heading Accession and Version

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