U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

kansl1l KAT8 regulatory NSL complex subunit 1 like [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 780033, updated on 5-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
kansl1lprovided by Xenbase
Official Full Name
KAT8 regulatory NSL complex subunit 1 likeprovided by Xenbase
Primary source
Xenbase:XB-GENE-6457137
See related
Ensembl:ENSXETG00000001088
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
c2orf67
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See kansl1l in Genome Data Viewer
Location:
chromosome: 9
Exon count:
18
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 9 NC_030685.2 (56663130..56699945)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 9 NC_030685.1 (50804467..50840915, complement)

Chromosome 9 - NC_030685.2Genomic Context describing neighboring genes Neighboring gene NME/NM23 family member 9 Neighboring gene dipeptidase E Neighboring gene acyl-CoA dehydrogenase long chain Neighboring gene myosin light chain 1 Neighboring gene LanC like glutathione S-transferase 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative. Klein SL, et al. Dev Dyn, 2002 Dec. PMID 12454917
  2. Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences. Strausberg RL, et al. Proc Natl Acad Sci U S A, 2002 Dec 24. PMID 12477932, Free PMC Article
  3. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Clone Names

  • MGC145580

Gene Ontology Provided by Xenbase

Component Evidence Code Pubs
part_of histone acetyltransferase complex IEA
Inferred from Electronic Annotation
more info
  

General protein information

Go to the top of the page Help
Preferred Names
KAT8 regulatory NSL complex subunit 1-like protein

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001079110.1 → NP_001072578.1  KAT8 regulatory NSL complex subunit 1-like protein

    See identical proteins and their annotated locations for NP_001072578.1

    Status: PROVISIONAL

    Source sequence(s)
    BC122934
    UniProtKB/Swiss-Prot
    Q0IHW6
    UniProtKB/TrEMBL
    A0A803JK58
    Related
    ENSXETP00000002380.2, ENSXETT00000002380.4
    Conserved Domains (1) summary
    pfam15275
    Location:749 → 855
    PEHE; PEHE domain

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030685.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    56663130..56699945
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012970553.3 → XP_012826007.1  KAT8 regulatory NSL complex subunit 1-like protein isoform X1

    UniProtKB/TrEMBL
    A0A803JFR5, A0A803JK58
    Related
    ENSXETP00000106736.1, ENSXETT00000106988.1
    Conserved Domains (1) summary
    pfam15275
    Location:765 → 871
    PEHE; PEHE domain

  2. XM_012970554.3 → XP_012826008.1  KAT8 regulatory NSL complex subunit 1-like protein isoform X2

    UniProtKB/TrEMBL
    A0A803JK58, A0A8J0SYV9
    Conserved Domains (1) summary
    pfam15275
    Location:760 → 866
    PEHE; PEHE domain

  3. XM_012970556.3 → XP_012826010.1  KAT8 regulatory NSL complex subunit 1-like protein isoform X3

    See identical proteins and their annotated locations for XP_012826010.1

    UniProtKB/Swiss-Prot
    Q0IHW6
    UniProtKB/TrEMBL
    A0A803JK58
    Conserved Domains (1) summary
    pfam15275
    Location:749 → 855
    PEHE; PEHE domain

  4. XM_012970557.3 → XP_012826011.1  KAT8 regulatory NSL complex subunit 1-like protein isoform X3

    See identical proteins and their annotated locations for XP_012826011.1

    UniProtKB/Swiss-Prot
    Q0IHW6
    UniProtKB/TrEMBL
    A0A803JK58
    Conserved Domains (1) summary
    pfam15275
    Location:749 → 855
    PEHE; PEHE domain

  5. XM_012970555.3 → XP_012826009.1  KAT8 regulatory NSL complex subunit 1-like protein isoform X3

    See identical proteins and their annotated locations for XP_012826009.1

    UniProtKB/Swiss-Prot
    Q0IHW6
    UniProtKB/TrEMBL
    A0A803JK58
    Conserved Domains (1) summary
    pfam15275
    Location:749 → 855
    PEHE; PEHE domain
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q0IHW6.1 GenPept UniProtKB/Swiss-Prot:Q0IHW6

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.