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FAM50A family with sequence similarity 50 member A [ Pan troglodytes (chimpanzee) ]

Gene ID: 742749, updated on 6-Jun-2024

Summary

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Official Symbol
FAM50Aprovided by VGNC
Official Full Name
family with sequence similarity 50 member Aprovided by VGNC
Primary source
VGNC:VGNC:3761
Locus tag
CK820_G0054707
See related
Ensembl:ENSPTRG00000022437
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See FAM50A in Genome Data Viewer
Location:
chromosome: X
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) X NC_072421.2 (151835988..151842560)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) X NC_072421.1 (151832080..151838618)

Chromosome X - NC_072421.2Genomic Context describing neighboring genes Neighboring gene ATPase H+ transporting accessory protein 1 Neighboring gene GDP dissociation inhibitor 1 Neighboring gene plexin A3 Neighboring gene L antigen family member 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in chromatin organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein FAM50A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072421.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    151835988..151842560
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_054676949.2 → XP_054532924.1  protein FAM50A isoform X3

    UniProtKB/TrEMBL
    A0A2J8IN30, A0A6D2Y9T0, H2QZA9

  2. XM_054676947.2 → XP_054532922.1  protein FAM50A isoform X1

    UniProtKB/TrEMBL
    A0A2J8IN32

  3. XM_063804251.1 → XP_063660321.1  protein FAM50A isoform X4

    UniProtKB/TrEMBL
    A0A2J8IN30, A0A6D2Y9T0, H2QZA9

  4. XM_054676948.2 → XP_054532923.1  protein FAM50A isoform X2

    UniProtKB/TrEMBL
    A0A2J8IN32
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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Molecular Biology Databases
Research Materials