U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TMCO6 transmembrane and coiled-coil domains 6 [ Pan troglodytes (chimpanzee) ]

Gene ID: 736706, updated on 29-Mar-2024

Summary

Go to the top of the page Help
Official Symbol
TMCO6provided by VGNC
Official Full Name
transmembrane and coiled-coil domains 6provided by VGNC
Primary source
VGNC:VGNC:4199
Locus tag
CK820_G0047140
See related
Ensembl:ENSPTRG00000017320
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TMCO6 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 4 NC_072402.2 (138354529..138360592)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 5 NC_072403.1 (138372686..138378743)

Chromosome 4 - NC_072402.2Genomic Context describing neighboring genes Neighboring gene HAUS augmin-like complex subunit 1 Neighboring gene CD14 molecule Neighboring gene NADH:ubiquinone oxidoreductase subunit A2 Neighboring gene IK cytokine

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables nuclear import signal receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transmembrane and coiled-coil domain-containing protein 6

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072402.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    138354529..138360592
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_001140277.8 → XP_001140277.1  transmembrane and coiled-coil domain-containing protein 6 isoform X1

    See identical proteins and their annotated locations for XP_001140277.1

    UniProtKB/TrEMBL
    A0A2J8JIS1, A0A2J8JIV7, A0A6D2VSM1, H2QRM5
    Related
    ENSPTRP00000029613.4
    Conserved Domains (2) summary
    sd00043
    Location:104 → 135
    ARM; armadillo repeat [structural motif]
    cl25709
    Location:23 → 399
    Arm_3; Atypical Arm repeat

  2. XM_009449813.5 → XP_009448088.1  transmembrane and coiled-coil domain-containing protein 6 isoform X2

    See identical proteins and their annotated locations for XP_009448088.1

    UniProtKB/TrEMBL
    A0A2J8JIS1, A0A2J8JIS7
    Conserved Domains (2) summary
    sd00043
    Location:104 → 135
    ARM; armadillo repeat [structural motif]
    cl25709
    Location:23 → 394
    Arm_3; Atypical Arm repeat

  3. XM_003310874.7 → XP_003310922.1  transmembrane and coiled-coil domain-containing protein 6 isoform X3

    See identical proteins and their annotated locations for XP_003310922.1

    UniProtKB/TrEMBL
    A0A2J8JIR1, A0A2J8JIS1, A0A8I3B1L6, K7AWL2, K7DGK3
    Related
    ENSPTRP00000069597.1
    Conserved Domains (2) summary
    sd00043
    Location:104 → 135
    ARM; armadillo repeat [structural motif]
    cl25709
    Location:23 → 393
    Arm_3; Atypical Arm repeat

  4. XM_009449814.5 → XP_009448089.1  transmembrane and coiled-coil domain-containing protein 6 isoform X4

    See identical proteins and their annotated locations for XP_009448089.1

    UniProtKB/TrEMBL
    A0A2J8JIS2
    Conserved Domains (2) summary
    cd00020
    Location:4 → 109
    ARM; Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, ...
    sd00043
    Location:34 → 69
    ARM; armadillo repeat [structural motif]
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases
Research Materials