DDX43 DEAD-box helicase 43 [Macaca mulatta (Rhesus monkey)] - Gene

Summary

Official Symbol: DDX43provided by VGNC
Official Full Name: DEAD-box helicase 43provided by VGNC
Primary source: VGNC:VGNC:71662
Locus tag: EGK_15075
See related: Ensembl:ENSMMUG00000019599
Gene type: protein coding
RefSeq status: MODEL
Organism: Macaca mulatta
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Macaca
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 4

Exon count:: 17

Annotation release	Status	Assembly	Chr	Location
103	current	Mmul_10 (GCF_003339765.1)	4	NC_041757.1 (99524640..99547243, complement)
102	previous assembly	Mmul_8.0.1 (GCF_000772875.2)	4	NC_027896.1 (71409798..71432666)

Chromosome 4 - NC_041757.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Submit: New GeneRIF Correction

General gene information

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Markers

SHGC-106295 (e-PCR)
- UniSTS:169730

ECD19348 (e-PCR)
- UniSTS:300354

REN32644 (e-PCR)
- UniSTS:357444

REN32645 (e-PCR)
- UniSTS:357445

REN32648 (e-PCR)
- UniSTS:357448

stSG625865 (e-PCR)
- UniSTS:457032

stSG625866 (e-PCR)
- UniSTS:457033

stSG625869 (e-PCR)
- UniSTS:457036

stSG625870 (e-PCR)
- UniSTS:457037

stSG625874 (e-PCR)
- UniSTS:457041

REN32658 (e-PCR)
- UniSTS:357458

REN32659 (e-PCR)
- UniSTS:357459

REN32660 (e-PCR)
- UniSTS:357460

REN32662 (e-PCR)
- UniSTS:357462

REN32663 (e-PCR)
- UniSTS:357463

REN32664 (e-PCR)
- UniSTS:357464

stSG625882 (e-PCR)
- UniSTS:457049

REN32667 (e-PCR)
- UniSTS:357467

REN32669 (e-PCR)
- UniSTS:357469

REN32674 (e-PCR)
- UniSTS:357474

REN32683 (e-PCR)
- UniSTS:357483

REN32684 (e-PCR)
- UniSTS:357484

REN32693 (e-PCR)
- UniSTS:357493

REN32694 (e-PCR)
- UniSTS:357494

REN32696 (e-PCR)
- UniSTS:357496

REN32697 (e-PCR)
- UniSTS:357497

REN32698 (e-PCR)
- UniSTS:357498

REN32700 (e-PCR)
- UniSTS:357500

REN32701 (e-PCR)
- UniSTS:357501

REN32704 (e-PCR)
- UniSTS:357504

ECD07071 (e-PCR)
- UniSTS:288129

REN32705 (e-PCR)
- UniSTS:357505

REN32706 (e-PCR)
- UniSTS:357506

REN32708 (e-PCR)
- UniSTS:357508

REN32709 (e-PCR)
- UniSTS:357509

REN32722 (e-PCR)
- UniSTS:357522

REN32728 (e-PCR)
- UniSTS:357528

ECD17892 (e-PCR)
- UniSTS:298904

REN32729 (e-PCR)
- UniSTS:357529

REN32730 (e-PCR)
- UniSTS:357530

REN32731 (e-PCR)
- UniSTS:357531

REN32732 (e-PCR)
- UniSTS:357532

REN32733 (e-PCR)
- UniSTS:357533

ECD23302 (e-PCR)
- UniSTS:304286

REN32739 (e-PCR)
- UniSTS:357539

REN32740 (e-PCR)
- UniSTS:357540

REN32741 (e-PCR)
- UniSTS:357541

REN32745 (e-PCR)
- UniSTS:357545

ECD24099 (e-PCR)
- UniSTS:305083

ECD14885 (e-PCR)
- UniSTS:295905

ECD14119 (e-PCR)
- UniSTS:295144

ECD20032 (e-PCR)
- UniSTS:301036

Homology

NCBI Orthologs

Orthologs from OrthoDB

Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables ATP binding	IEA Inferred from Electronic Annotation more info	PubMed
enables RNA binding	IEA Inferred from Electronic Annotation more info	PubMed
enables RNA helicase activity	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: probable ATP-dependent RNA helicase DDX43

XP_001112413.1

EC 3.6.4.13

XP_028703244.1

EC 3.6.4.13

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Macaca mulatta Annotation Release 103 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Mmul_10 Primary Assembly

Genomic

NC_041757.1 Reference Mmul_10 Primary Assembly

Range

99524640..99547243 complement

Download

GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_028847411.1 → XP_028703244.1 probable ATP-dependent RNA helicase DDX43 isoform X2

Conserved Domains (1) summary

PTZ00110
Location:52 → 512

PTZ00110; helicase; Provisional
XM_001112413.4 → XP_001112413.1 probable ATP-dependent RNA helicase DDX43 isoform X1

See identical proteins and their annotated locations for XP_001112413.1

UniProtKB/TrEMBL

A0A8J8XP20, F7B8M1, G7MPQ6

Related

ENSMMUP00000025745.2, ENSMMUT00000027527.4

Conserved Domains (4) summary

PTZ00424
Location:241 → 622

PTZ00424; helicase 45; Provisional

cd00079
Location:488 → 589

HELICc; Helicase superfamily c-terminal domain; associated with DEXDc-, DEAD-, and DEAH-box proteins, yeast initiation factor 4A, Ski2p, and Hepatitis C virus NS3 helicases; this domain is found in a wide variety of helicases and helicase related proteins; may ...

cd00105
Location:76 → 128

KH-I; K homology RNA-binding domain, type I. KH binds single-stranded RNA or DNA. It is found in a wide variety of proteins including ribosomal proteins, transcription factors and post-transcriptional modifiers of mRNA. There are two different KH domains that ...

cd00268
Location:251 → 448

DEADc; DEAD-box helicases. A diverse family of proteins involved in ATP-dependent RNA unwinding, needed in a variety of cellular processes including splicing, ribosome biogenesis and RNA degradation. The name derives from the sequence of the Walker B motif ...