RPSA ribosomal protein SA [Sus scrofa (pig)] - Gene

Summary

Gene symbol: RPSA
Gene description: ribosomal protein SA
See related: Ensembl:ENSSSCG00000037236
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Sus scrofa
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Also known as: LAMR1
Expression: Ubiquitous expression in spleen (RPKM 881.7), subcutaneous adipose (RPKM 712.7) and 8 other tissues See more
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 13

Exon count:: 7

Annotation release	Status	Assembly	Chr	Location
106	current	Sscrofa11.1 (GCF_000003025.6)	13	NC_010455.5 (24072551..24081536)
105	previous assembly	Sscrofa10.2 (GCF_000003025.5)	13	NC_010455.4 (26391337..26393313) , (26315726..26319088, complement)

Chromosome 13 - NC_010455.5 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

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Expression

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See details

Project title: Transcriptome data used for gene annotation
Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
BioProject: PRJNA311523
Publication: PMID 27646534
Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

These results indicate that LamR is a cellular attachment receptor for classical Swine Fever virus.
Title: The laminin receptor is a cellular attachment receptor for classical Swine Fever virus.
Dengue virus serotypes 1, 2 and 3 all interact with the 37 kDa/67 kDa laminin receptor (LAMR1), a common non-integrin surface protein on many cell types.
Title: Two dimensional VOPBA reveals laminin receptor (LAMR1) interaction with dengue virus serotypes 1, 2 and 3.
isolated a ribosomal protein SA cDNA that consists of 1064 bp with an open reading frame of 885 bp encoding a 295 aa protein
Title: Characterization of the porcine multicopy ribosomal protein SA/37-kDa laminin receptor gene family.

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables laminin receptor activity	IEA Inferred from Electronic Annotation more info	PubMed
enables structural constituent of ribosome	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in cytoplasmic translation	IEA Inferred from Electronic Annotation more info	PubMed
involved_in ribosomal small subunit assembly	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
part_of 90S preribosome	IEA Inferred from Electronic Annotation more info	PubMed
part_of cytosolic small ribosomal subunit	IEA Inferred from Electronic Annotation more info	PubMed
located_in ribosome	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: small ribosomal subunit protein uS2

Names: 37 kDa laminin receptor; 37/67 kDa laminin receptor; 37LRP; 40S ribosomal protein SA; 67 kDa laminin receptor; 67LR; LBP/p40; LRP/LR; lamR; laminin receptor 1; laminin-binding protein precursor p40

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.