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IQCA1 IQ motif containing with AAA domain 1 [ Bos taurus (cattle) ]

Gene ID: 618101, updated on 6-Jun-2024

Summary

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Official Symbol
IQCA1provided by VGNC
Official Full Name
IQ motif containing with AAA domain 1provided by VGNC
Primary source
VGNC:VGNC:30248
See related
BGD:BT21098; Ensembl:ENSBTAG00000013505
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
IQCA
Orthologs
human mouse all
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Genomic context

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See IQCA1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (115779091..115967665, complement)

Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene ankyrin repeat and SOCS box containing 18 Neighboring gene transfer RNA glutamic acid (anticodon UUC) Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene atypical chemokine receptor 3 Neighboring gene histone-lysine N-methyltransferase SETMAR-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
  2. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  3. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dynein regulatory complex protein 11

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001206547.1 → NP_001193476.1  dynein regulatory complex protein 11

    See identical proteins and their annotated locations for NP_001193476.1

    Status: VALIDATED

    Source sequence(s)
    EE250424, EE346641, EV706046, NKLS02000003
    UniProtKB/TrEMBL
    A0AAA9SWC5
    Conserved Domains (2) summary
    COG0464
    Location:488 → 788
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    pfam00004
    Location:571 → 686
    AAA; ATPase family associated with various cellular activities (AAA)

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    115779091..115967665 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010803867.4 → XP_010802169.1  dynein regulatory complex protein 11 isoform X3

    UniProtKB/TrEMBL
    A0AAA9SYW0
    Related
    ENSBTAP00000089464.1, ENSBTAT00000111535.1
    Conserved Domains (2) summary
    COG0464
    Location:449 → 749
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    pfam00004
    Location:532 → 647
    AAA; ATPase family associated with various cellular activities (AAA)

  2. XM_015467211.3 → XP_015322697.1  dynein regulatory complex protein 11 isoform X2

    UniProtKB/TrEMBL
    A0AAA9SWC5
    Conserved Domains (2) summary
    COG0464
    Location:462 → 762
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    pfam00004
    Location:545 → 660
    AAA; ATPase family associated with various cellular activities (AAA)

  3. XM_010803866.4 → XP_010802168.1  dynein regulatory complex protein 11 isoform X1

    UniProtKB/TrEMBL
    A0AAA9SWC5, A0AAA9T044
    Related
    ENSBTAP00000089756.1, ENSBTAT00000088872.1
    Conserved Domains (2) summary
    COG0464
    Location:489 → 789
    SpoVK; AAA+-type ATPase, SpoVK/Ycf46/Vps4 family [Cell wall/membrane/envelope biogenesis, Cell cycle control, cell division, chromosome partitioning, Signal transduction mechanisms]
    pfam00004
    Location:572 → 687
    AAA; ATPase family associated with various cellular activities (AAA)
Nucleotide Protein Strain
Heading Accession and Version

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