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BRME1 break repair meiotic recombinase recruitment factor 1 [ Canis lupus familiaris (dog) ]

Gene ID: 610858, updated on 5-Mar-2024

Summary

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Official Symbol
BRME1provided by VGNC
Official Full Name
break repair meiotic recombinase recruitment factor 1provided by VGNC
Primary source
VGNC:VGNC:52517
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Also known as
C20H19orf57
Orthologs
human mouse all
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Genomic context

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See BRME1 in Genome Data Viewer
Location:
chromosome: 20
Exon count:
11
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 20 NC_051824.1 (49084407..49104890)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 20 NC_006602.4 (48440230..48460994)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 20 NC_049241.1 (48964713..48985640)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 20 NC_049280.1 (48294920..48315682)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 20 NC_049761.1 (48721393..48742590)

Chromosome 20 - NC_051824.1Genomic Context describing neighboring genes Neighboring gene podocan like 1 Neighboring gene coiled-coil and C2 domain containing 1A Neighboring gene nanos C2HC-type zinc finger 3 Neighboring gene microRNA mir-181d

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in double-strand break repair involved in meiotic recombination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
break repair meiotic recombinase recruitment factor 1
Names
chromosome 20 C19orf57 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051824.1 Reference ROS_Cfam_1.0

    Range
    49084407..49104890
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038428407.1 → XP_038284335.1  break repair meiotic recombinase recruitment factor 1 isoform X1

    Conserved Domains (1) summary
    pfam15710
    Location:1 → 715
    DUF4671; Domain of unknown function (DUF4671)

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049280.1 Alternate UMICH_Zoey_3.1

    Range
    48294920..48315682
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038504047.1 → XP_038359975.1  break repair meiotic recombinase recruitment factor 1 isoform X2

  2. XM_038504050.1 → XP_038359978.1  break repair meiotic recombinase recruitment factor 1 isoform X1

    Conserved Domains (1) summary
    pfam15710
    Location:1 → 715
    DUF4671; Domain of unknown function (DUF4671)

  3. XM_038504049.1 → XP_038359977.1  break repair meiotic recombinase recruitment factor 1 isoform X2

  4. XM_038504048.1 → XP_038359976.1  break repair meiotic recombinase recruitment factor 1 isoform X2

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049761.1 Alternate UNSW_CanFamBas_1.0

    Range
    48721393..48742590
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038631216.1 → XP_038487144.1  break repair meiotic recombinase recruitment factor 1 isoform X3

  2. XM_038631219.1 → XP_038487147.1  break repair meiotic recombinase recruitment factor 1 isoform X1

    Conserved Domains (1) summary
    pfam15710
    Location:1 → 715
    DUF4671; Domain of unknown function (DUF4671)

  3. XM_038631218.1 → XP_038487146.1  break repair meiotic recombinase recruitment factor 1 isoform X3

  4. XM_038631217.1 → XP_038487145.1  break repair meiotic recombinase recruitment factor 1 isoform X3

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049241.1 Alternate UU_Cfam_GSD_1.0

    Range
    48964713..48985640
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038567072.1 → XP_038423000.1  break repair meiotic recombinase recruitment factor 1 isoform X4

  2. XM_038567075.1 → XP_038423003.1  break repair meiotic recombinase recruitment factor 1 isoform X1

    Conserved Domains (1) summary
    pfam15710
    Location:1 → 715
    DUF4671; Domain of unknown function (DUF4671)

  3. XM_038567074.1 → XP_038423002.1  break repair meiotic recombinase recruitment factor 1 isoform X4

  4. XM_038567073.1 → XP_038423001.1  break repair meiotic recombinase recruitment factor 1 isoform X4

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006602.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    48440230..48460994
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022406977.2 → XP_022262685.1  break repair meiotic recombinase recruitment factor 1 isoform X5

    Conserved Domains (1) summary
    pfam15710
    Location:1 → 667
    DUF4671; Domain of unknown function (DUF4671)

  2. XM_005632804.3 → XP_005632861.1  break repair meiotic recombinase recruitment factor 1 isoform X1

    See identical proteins and their annotated locations for XP_005632861.1

    UniProtKB/TrEMBL
    E2QX21
    Conserved Domains (1) summary
    pfam15710
    Location:1 → 715
    DUF4671; Domain of unknown function (DUF4671)

  3. XM_022406979.2 → XP_022262687.1  break repair meiotic recombinase recruitment factor 1 isoform X5

    Conserved Domains (1) summary
    pfam15710
    Location:1 → 667
    DUF4671; Domain of unknown function (DUF4671)

  4. XM_022406978.1 → XP_022262686.1  break repair meiotic recombinase recruitment factor 1 isoform X5

    Conserved Domains (1) summary
    pfam15710
    Location:1 → 667
    DUF4671; Domain of unknown function (DUF4671)
Nucleotide Protein
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