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sh3bgrl2 SH3 domain binding glutamate-rich protein like 2 [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 548909, updated on 5-Mar-2024

Summary

Official Symbol
sh3bgrl2provided by Xenbase
Official Full Name
SH3 domain binding glutamate-rich protein like 2provided by Xenbase
Primary source
Xenbase:XB-GENE-1015677
See related
Ensembl:ENSXETG00000025848
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
sh3bgrl2-a; sh3bgrl2-b
Orthologs
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Genomic context

See sh3bgrl2 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
4
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 5 NC_030681.2 (89732417..89745956, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 5 NC_030681.1 (79393596..79407135)

Chromosome 5 - NC_030681.2Genomic Context describing neighboring genes Neighboring gene DEAD-box helicase 43 Neighboring gene dynein gamma chain, flagellar outer arm Neighboring gene ELOVL fatty acid elongase 4 Neighboring gene LCA5, lebercilin Neighboring gene high mobility group nucleosomal binding domain 3

Genomic regions, transcripts, and products

General gene information

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
is_active_in cytoplasm IBA
Inferred from Biological aspect of Ancestor
more info
 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
SH3 domain-binding glutamic acid-rich-like protein 2
Names
SH3 domain binding glutamic acid-rich protein like 2

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001016155.2NP_001016155.1  SH3 domain-binding glutamic acid-rich-like protein 2

    See identical proteins and their annotated locations for NP_001016155.1

    Status: PROVISIONAL

    Source sequence(s)
    CR761949
    UniProtKB/Swiss-Prot
    Q28FJ0
    Related
    ENSXETP00000054866.2, ENSXETT00000054866.4
    Conserved Domains (1) summary
    cd03030
    Location:297
    GRX_SH3BGR; Glutaredoxin (GRX) family, SH3BGR (SH3 domain binding glutamic acid-rich protein) subfamily; a recently-identified subfamily composed of SH3BGR and similar proteins possessing significant sequence similarity to GRX, but without a redox active CXXC motif. ...

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030681.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    89732417..89745956 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)