ZSCAN10 zinc finger and SCAN domain containing 10 [Bos taurus (cattle)] - Gene

Summary

Official Symbol: ZSCAN10provided by VGNC
Official Full Name: zinc finger and SCAN domain containing 10provided by VGNC
Primary source: VGNC:VGNC:37374
See related: BGD:BT19085; Ensembl:ENSBTAG00000034238
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Bos taurus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 25

Exon count:: 5

Annotation release	Status	Assembly	Chr	Location
RS_2023_09	current	ARS-UCD2.0 (GCF_002263795.3)	25	NC_037352.1 (2540747..2544804, complement)

Chromosome 25 - NC_037352.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Go to reference sequence details

Genomic Sequence:: NC_037352.1 Chromosome 25 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

Data show that nuclear respiratory factor 1 (NRF1) and zinc finger and SCAN domain-containing protein 10 (ZSCAN10) binding occurred in the promoter region of diplotypes H1-H2 to regulate homeobox protein SIX1 (SIX1) transcriptional activity.
Title: NRF1 and ZSCAN10 bind to the promoter region of the SIX1 gene and their effects body measurements in Qinchuan cattle.

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables DNA-binding transcription repressor activity, RNA polymerase II-specific	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in negative regulation of transcription by RNA polymerase II	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: zinc finger and SCAN domain-containing protein 10

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001192113.1 → NP_001179042.1 zinc finger and SCAN domain-containing protein 10

See identical proteins and their annotated locations for NP_001179042.1

Status: PROVISIONAL

Source sequence(s)

NKLS02000025

Related

ENSBTAP00000089107.1, ENSBTAT00000127004.1

Conserved Domains (6) summary

cd07936
Location:1 → 69

SCAN; SCAN oligomerization domain

COG5048
Location:344 → 722

COG5048; FOG: Zn-finger [General function prediction only]

sd00017
Location:582 → 602

ZF_C2H2; C2H2 Zn finger [structural motif]

pfam00096
Location:702 → 724

zf-C2H2; Zinc finger, C2H2 type

pfam13465
Location:594 → 619

zf-H2C2_2; Zinc-finger double domain

cl19880
Location:403 → 444

ROS_MUCR; ROS/MUCR transcriptional regulator protein