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ANKRD52 ankyrin repeat domain 52 [ Bos taurus (domestic cattle) ]

Gene ID: 521057, updated on 17-Aug-2024

Summary

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Official Symbol
ANKRD52provided by VGNC
Official Full Name
ankyrin repeat domain 52provided by VGNC
Primary source
VGNC:VGNC:25935
See related
BGD:BT16576; Ensembl:ENSBTAG00000011762
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See ANKRD52 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
28
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 5 NC_037332.1 (57074887..57086731)

Chromosome 5 - NC_037332.1Genomic Context describing neighboring genes Neighboring gene interleukin 23 subunit alpha Neighboring gene citrate synthase Neighboring gene coenzyme Q10A Neighboring gene microRNA mir-2433 Neighboring gene solute carrier family 39 member 5 Neighboring gene nucleic acid binding protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037332.1 Chromosome 5 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001192530.1 → NP_001179459.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C

    See identical proteins and their annotated locations for NP_001179459.1

    Status: PROVISIONAL

    Source sequence(s)
    NKLS02000005
    UniProtKB/TrEMBL
    A0AAA9S1F6
    Related
    ENSBTAP00000079707.1, ENSBTAT00000096358.1
    Conserved Domains (5) summary
    cd00204
    Location:417 → 570
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    sd00045
    Location:108 → 137
    ANK; ANK repeat [structural motif]
    pfam13637
    Location:791 → 843
    Ank_4; Ankyrin repeats (many copies)
    cl26072
    Location:962 → 1029
    Ank_5; Ankyrin repeats (many copies)
    cl26073
    Location:20 → 317
    Ank_2; Ankyrin repeats (3 copies)

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037332.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    57074887..57086731
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010805185.3 → XP_010803487.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X1

    See identical proteins and their annotated locations for XP_010803487.1

    UniProtKB/TrEMBL
    A0AAA9SEW2
    Related
    ENSBTAP00000080959.1, ENSBTAT00000119993.1
    Conserved Domains (4) summary
    cd00204
    Location:134 → 259
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:177 → 269
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:11 → 61
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:108 → 137
    ANK; ANK repeat [structural motif]

  2. XM_005206618.5 → XP_005206675.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X1

    See identical proteins and their annotated locations for XP_005206675.1

    UniProtKB/TrEMBL
    A0AAA9SEW2
    Conserved Domains (4) summary
    cd00204
    Location:134 → 259
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:177 → 269
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:11 → 61
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:108 → 137
    ANK; ANK repeat [structural motif]
Nucleotide Protein Strain
Heading Accession and Version

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