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ANKRD52 ankyrin repeat domain 52 [ Homo sapiens (human) ]

Gene ID: 283373, updated on 7-Oct-2018

Summary

Official Symbol
ANKRD52provided by HGNC
Official Full Name
ankyrin repeat domain 52provided by HGNC
Primary source
HGNC:HGNC:26614
See related
Ensembl:ENSG00000139645 Vega:OTTHUMG00000170329
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
ANKRD33
Expression
Ubiquitous expression in brain (RPKM 7.6), adrenal (RPKM 6.8) and 25 other tissues See more
Orthologs

Genomic context

See ANKRD52 in Genome Data Viewer
Location:
12q13.3
Exon count:
29
Annotation release Status Assembly Chr Location
109 current GRCh38.p12 (GCF_000001405.38) 12 NC_000012.12 (56237807..56258391, complement)
105 previous assembly GRCh37.p13 (GCF_000001405.25) 12 NC_000012.11 (56631591..56652143, complement)

Chromosome 12 - NC_000012.12Genomic Context describing neighboring genes Neighboring gene ring finger protein 41 Neighboring gene nucleic acid binding protein 2 Neighboring gene solute carrier family 39 member 5 Neighboring gene coenzyme Q10A Neighboring gene citrate synthase

Genomic regions, transcripts, and products

Expression

  • Project title: HPA RNA-seq normal tissues
  • Description: RNA-seq was performed of tissue samples from 95 human individuals representing 27 different tissues in order to determine tissue-specificity of all protein-coding genes
  • BioProject: PRJEB4337
  • Publication: PMID 24309898
  • Analysis date: Wed Jun 15 11:32:44 2016

Bibliography

GeneRIFs: Gene References Into FunctionsWhat's a GeneRIF?

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Homology

Clone Names

  • FLJ34236

Gene Ontology Provided by GOA

Function Evidence Code Pubs
protein binding IPI
Inferred from Physical Interaction
more info
PubMed 

General protein information

Preferred Names
serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C
Names
CVWG5837
PP6-ARS-C
ankyrin repeat domain 33
ankyrin repeat domain-containing protein 52
protein phosphatase 6 ankyrin repeat subunit C
serine/threonine-protein phosphatase 6 regulatory subunit ARS-C

NCBI Reference Sequences (RefSeq)

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_173595.3NP_775866.2  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C

    See identical proteins and their annotated locations for NP_775866.2

    Status: VALIDATED

    Source sequence(s)
    AC073896, AK125379, DR002390
    Consensus CDS
    CCDS44920.1
    UniProtKB/Swiss-Prot
    Q8NB46
    UniProtKB/TrEMBL
    B3KWN0
    Related
    ENSP00000267116.7, OTTHUMP00000243511, ENST00000267116.7, OTTHUMT00000408539
    Conserved Domains (4) summary
    cd00204
    Location:134259
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:177269
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:1161
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:108137
    ANK; ANK repeat [structural motif]

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 109 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p12 Primary Assembly

Genomic

  1. NC_000012.12 Reference GRCh38.p12 Primary Assembly

    Range
    56237807..56258391 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_017019184.1XP_016874673.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X2

  2. XM_017019183.1XP_016874672.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X1

  3. XM_011538197.2XP_011536499.1  serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X3

    Conserved Domains (4) summary
    cd00204
    Location:73198
    ANK; ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins. The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other ...
    pfam12796
    Location:116208
    Ank_2; Ankyrin repeats (3 copies)
    pfam13637
    Location:1365
    Ank_4; Ankyrin repeats (many copies)
    sd00045
    Location:4776
    ANK; ANK repeat [structural motif]
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