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MRPS9 mitochondrial ribosomal protein S9 [ Bos taurus (cattle) ]

Gene ID: 519302, updated on 5-Mar-2024

Summary

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Official Symbol
MRPS9provided by VGNC
Official Full Name
mitochondrial ribosomal protein S9provided by VGNC
Primary source
VGNC:VGNC:31678
See related
BGD:BT27905; Ensembl:ENSBTAG00000006150
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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See MRPS9 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 11 NC_037338.1 (9114005..9151929)

Chromosome 11 - NC_037338.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC101909815 Neighboring gene POU class 3 homeobox 3 Neighboring gene G protein-coupled receptor 45 Neighboring gene transforming growth factor beta receptor associated protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037338.1 Chromosome 11 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of four proteins from the small subunit of the mammalian mitochondrial ribosome using a proteomics approach. Koc EC, et al. Protein Sci, 2001 Mar. PMID 11344316, Free PMC Article
  2. Cryo-EM structure of the small subunit of the mammalian mitochondrial ribosome. Kaushal PS, et al. Proc Natl Acad Sci U S A, 2014 May 20. PMID 24799711, Free PMC Article
  3. Sequence evaluation of four pooled-tissue normalized bovine cDNA libraries and construction of a gene index for cattle. Smith TP, et al. Genome Res, 2001 Apr. PMID 11282978, Free PMC Article
  4. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  5. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

Clone Names

  • MGC134295

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial small ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
small ribosomal subunit protein uS9m
Names
28S ribosomal protein S9, mitochondrial
MRP-S9
S9mt

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001035332.1 → NP_001030409.1  small ribosomal subunit protein uS9m

    See identical proteins and their annotated locations for NP_001030409.1

    Status: PROVISIONAL

    Source sequence(s)
    BT021542
    UniProtKB/TrEMBL
    A0A3Q1MBM0
    Related
    ENSBTAP00000066078.2, ENSBTAT00000080717.2
    Conserved Domains (1) summary
    pfam00380
    Location:274 → 355
    Ribosomal_S9; Ribosomal protein S9/S16

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037338.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    9114005..9151929
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005212443.5 → XP_005212500.1  small ribosomal subunit protein uS9m isoform X1

    See identical proteins and their annotated locations for XP_005212500.1

    UniProtKB/Swiss-Prot
    P82676, Q0V8L9, Q32LH0, Q58DQ5, Q5BIN8
    UniProtKB/TrEMBL
    A0A3Q1MBM0
    Related
    ENSBTAP00000008093.4, ENSBTAT00000008093.5
    Conserved Domains (1) summary
    pfam00380
    Location:274 → 396
    Ribosomal_S9; Ribosomal protein S9/S16
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q58DQ5.3 GenPept UniProtKB/Swiss-Prot:Q58DQ5

Gene LinkOut

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