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NASP nuclear autoantigenic sperm protein [ Bos taurus (domestic cattle) ]

Gene ID: 512427, updated on 24-Aug-2024

Summary

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Official Symbol
NASPprovided by VGNC
Official Full Name
nuclear autoantigenic sperm proteinprovided by VGNC
Primary source
VGNC:VGNC:31887
See related
BGD:BT13359; Ensembl:ENSBTAG00000015346
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 3 NC_037330.1 (100460372..100489151, complement)

Chromosome 3 - NC_037330.1Genomic Context describing neighboring genes Neighboring gene GC-rich promoter binding protein 1 like 1 Neighboring gene coiled-coil domain containing 17 Neighboring gene aldo-keto reductase family 1 member A1 Neighboring gene large ribosomal subunit protein uL22-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_037330.1 Chromosome 3 Reference ARS-UCD2.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Requirement for nuclear autoantigenic sperm protein mRNA expression in bovine preimplantation development. Nagatomo H, et al. Anim Sci J, 2016 Mar. PMID 26690724
  2. Analysis of bovine mammary gland EST and functional annotation of the Bos taurus gene index. Sonstegard TS, et al. Mamm Genome, 2002 Jul. PMID 12140684
  3. Characterization of 954 bovine full-CDS cDNA sequences. Harhay GP, et al. BMC Genomics, 2005 Nov 23. PMID 16305752, Free PMC Article
  4. A whole-genome assembly of the domestic cow, Bos taurus. Zimin AV, et al. Genome Biol, 2009. PMID 19393038, Free PMC Article

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. NASP mRNA expression is required for preimplantation development into the blastocyst stage in cattle.
    Title: Requirement for nuclear autoantigenic sperm protein mRNA expression in bovine preimplantation development.
Submit: New GeneRIF Correction

General gene information

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Markers

Homology

Clone Names

  • MGC134231

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in CENP-A containing chromatin assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in DNA replication-dependent chromatin assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nuclear autoantigenic sperm protein
Names
nuclear autoantigenic sperm protein (histone-binding)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001038088.3 → NP_001033177.2  nuclear autoantigenic sperm protein

    See identical proteins and their annotated locations for NP_001033177.2

    Status: PROVISIONAL

    Source sequence(s)
    BC111329
    UniProtKB/Swiss-Prot
    Q2T9P4
    UniProtKB/TrEMBL
    A0A3Q1M1D3
    Conserved Domains (4) summary
    sd00006
    Location:507 → 530
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:573 → 602
    TPR_1; Tetratricopeptide repeat
    pfam10516
    Location:531 → 568
    SHNi-TPR; SHNi-TPR
    pfam13424
    Location:528 → 605
    TPR_12; Tetratricopeptide repeat

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037330.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    100460372..100489151 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_010803604.4 → XP_010801906.1  nuclear autoantigenic sperm protein isoform X2

    UniProtKB/TrEMBL
    A0A3Q1M1D3, A0A3Q1M5Q7
    Related
    ENSBTAP00000065266.2, ENSBTAT00000068707.2
    Conserved Domains (4) summary
    sd00006
    Location:507 → 530
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:573 → 602
    TPR_1; Tetratricopeptide repeat
    pfam10516
    Location:531 → 568
    SHNi-TPR; SHNi-TPR
    pfam13424
    Location:528 → 605
    TPR_12; Tetratricopeptide repeat

  2. XM_059883558.1 → XP_059739541.1  nuclear autoantigenic sperm protein isoform X1

    UniProtKB/Swiss-Prot
    Q2T9P4
    UniProtKB/TrEMBL
    A0A3Q1M1D3

  3. XM_010803605.4 → XP_010801907.1  nuclear autoantigenic sperm protein isoform X3

    See identical proteins and their annotated locations for XP_010801907.1

    UniProtKB/TrEMBL
    A0AAA9TXM6, A5D969
    Related
    ENSBTAP00000048905.4, ENSBTAT00000057267.4
    Conserved Domains (3) summary
    sd00006
    Location:180 → 203
    TPR; TPR repeat [structural motif]
    pfam10516
    Location:204 → 241
    SHNi-TPR; SHNi-TPR
    pfam13424
    Location:202 → 278
    TPR_12; Tetratricopeptide repeat

  4. XM_010803603.4 → XP_010801905.1  nuclear autoantigenic sperm protein isoform X1

    See identical proteins and their annotated locations for XP_010801905.1

    UniProtKB/Swiss-Prot
    Q2T9P4
    UniProtKB/TrEMBL
    A0A3Q1M1D3
    Related
    ENSBTAP00000063517.2, ENSBTAT00000078061.2
    Conserved Domains (4) summary
    sd00006
    Location:507 → 530
    TPR; TPR repeat [structural motif]
    pfam00515
    Location:573 → 602
    TPR_1; Tetratricopeptide repeat
    pfam10516
    Location:531 → 568
    SHNi-TPR; SHNi-TPR
    pfam13424
    Location:528 → 605
    TPR_12; Tetratricopeptide repeat
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q2T9P4.2 GenPept UniProtKB/Swiss-Prot:Q2T9P4

Gene LinkOut

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Molecular Biology Databases
Research Materials