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BSG basigin [ Bos taurus (cattle) ]

Gene ID: 508716, updated on 6-Jun-2024

Summary

Official Symbol
BSGprovided by VGNC
Official Full Name
basiginprovided by VGNC
Primary source
VGNC:VGNC:52220
See related
BGD:BT17183; Ensembl:ENSBTAG00000016648
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bos taurus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Ruminantia; Pecora; Bovidae; Bovinae; Bos
Also known as
RPE7; EMMPRIN
Orthologs
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Genomic context

See BSG in Genome Data Viewer
Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_09 current ARS-UCD2.0 (GCF_002263795.3) 7 NC_037334.1 (43201661..43208638)

Chromosome 7 - NC_037334.1Genomic Context describing neighboring genes Neighboring gene cell division cycle 34, ubiqiutin conjugating enzyme Neighboring gene granzyme M Neighboring gene uncharacterized LOC132345739 Neighboring gene hyperpolarization activated cyclic nucleotide gated potassium and sodium channel 2 Neighboring gene uncharacterized LOC132345738 Neighboring gene RNA polymerase mitochondrial

Genomic regions, transcripts, and products

Genomic Sequence:
NC_037334.1 Chromosome 7 Reference ARS-UCD2.0 Primary Assembly

Bibliography

Pathways from PubChem

General gene information

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cell adhesion molecule binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cell-cell junction IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
basigin
Names
basigin (Ok blood group)

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001075371.2NP_001068839.1  basigin precursor

    See identical proteins and their annotated locations for NP_001068839.1

    Status: PROVISIONAL

    Source sequence(s)
    BC103059
    UniProtKB/TrEMBL
    A0AAA9SSZ2, Q3ZBX0
    Related
    ENSBTAP00000039862.5, ENSBTAT00000040082.6
    Conserved Domains (2) summary
    smart00410
    Location:112202
    IG_like; Immunoglobulin like
    cl11960
    Location:104202
    Ig; Immunoglobulin domain

RefSeqs of Annotated Genomes: GCF_002263795.3-RS_2023_09

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ARS-UCD2.0 Primary Assembly

Genomic

  1. NC_037334.1 Reference ARS-UCD2.0 Primary Assembly

    Range
    43201661..43208638
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)