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MED28 mediator complex subunit 28 [ Canis lupus familiaris (dog) ]

Gene ID: 488813, updated on 5-Mar-2024

Summary

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Official Symbol
MED28provided by VGNC
Official Full Name
mediator complex subunit 28provided by VGNC
Primary source
VGNC:VGNC:43135
See related
Ensembl:ENSCAFG00845000492
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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See MED28 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 3 NC_051807.1 (63361929..63370414, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 3 NC_006585.4 (65402933..65411431, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 3 NC_049224.1 (63416522..63425004, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 3 NC_049263.1 (62853223..62861690, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 3 NC_049744.1 (63057192..63065659, complement)

Chromosome 3 - NC_051807.1Genomic Context describing neighboring genes Neighboring gene macrophage erythroblast attacher, E3 ubiquitin ligase Neighboring gene uncharacterized LOC111095257 Neighboring gene family with sequence similarity 184 member B Neighboring gene 40S ribosomal protein S4-like Neighboring gene uncharacterized LOC111095258 Neighboring gene leucine aminopeptidase 3 Neighboring gene clarin 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
part_of mediator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mediator of RNA polymerase II transcription subunit 28
Names
mediator of RNA polymerase II transcription, subunit 28 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051807.1 Reference ROS_Cfam_1.0

    Range
    63361929..63370414 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038661818.1 → XP_038517746.1  mediator of RNA polymerase II transcription subunit 28

    UniProtKB/TrEMBL
    A0A8C0M841, A0A8C0QZL5, A0A8I3MAU1, A0A8P0SJN4
    Conserved Domains (1) summary
    pfam11594
    Location:40 → 140
    Med28; Mediator complex subunit 28

  2. XM_038661817.1 → XP_038517745.1  mediator of RNA polymerase II transcription subunit 28

    UniProtKB/TrEMBL
    A0A8C0M841, A0A8C0QZL5, A0A8I3MAU1, A0A8P0SJN4
    Related
    ENSCAFP00845000588.1, ENSCAFT00845000791.1
    Conserved Domains (1) summary
    pfam11594
    Location:40 → 140
    Med28; Mediator complex subunit 28

  3. XM_038661816.1 → XP_038517744.1  mediator of RNA polymerase II transcription subunit 28

    UniProtKB/TrEMBL
    A0A8C0M841, A0A8C0QZL5, A0A8I3MAU1, A0A8P0SJN4
    Related
    ENSCAFP00845000596.1, ENSCAFT00845000801.1
    Conserved Domains (1) summary
    pfam11594
    Location:40 → 140
    Med28; Mediator complex subunit 28

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049263.1 Alternate UMICH_Zoey_3.1

    Range
    62853223..62861690 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038472333.1 → XP_038328261.1  mediator of RNA polymerase II transcription subunit 28

    Conserved Domains (1) summary
    pfam11594
    Location:40 → 140
    Med28; Mediator complex subunit 28

  2. XM_038472332.1 → XP_038328260.1  mediator of RNA polymerase II transcription subunit 28

    Conserved Domains (1) summary
    pfam11594
    Location:40 → 140
    Med28; Mediator complex subunit 28

  3. XM_038472331.1 → XP_038328259.1  mediator of RNA polymerase II transcription subunit 28

    Conserved Domains (1) summary
    pfam11594
    Location:40 → 140
    Med28; Mediator complex subunit 28

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049744.1 Alternate UNSW_CanFamBas_1.0

    Range
    63057192..63065659 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038597637.1 → XP_038453565.1  mediator of RNA polymerase II transcription subunit 28

    Conserved Domains (1) summary
    pfam11594
    Location:40 → 140
    Med28; Mediator complex subunit 28

  2. XM_038597636.1 → XP_038453564.1  mediator of RNA polymerase II transcription subunit 28

    Conserved Domains (1) summary
    pfam11594
    Location:40 → 140
    Med28; Mediator complex subunit 28

  3. XM_038597635.1 → XP_038453563.1  mediator of RNA polymerase II transcription subunit 28

    Conserved Domains (1) summary
    pfam11594
    Location:40 → 140
    Med28; Mediator complex subunit 28

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049224.1 Alternate UU_Cfam_GSD_1.0

    Range
    63416522..63425004 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038533309.1 → XP_038389237.1  mediator of RNA polymerase II transcription subunit 28

    UniProtKB/TrEMBL
    A0A8C0M841, A0A8C0QZL5, A0A8I3MAU1, A0A8P0SJN4
    Conserved Domains (1) summary
    pfam11594
    Location:40 → 140
    Med28; Mediator complex subunit 28

  2. XM_038533308.1 → XP_038389236.1  mediator of RNA polymerase II transcription subunit 28

    UniProtKB/TrEMBL
    A0A8C0M841, A0A8C0QZL5, A0A8I3MAU1, A0A8P0SJN4
    Conserved Domains (1) summary
    pfam11594
    Location:40 → 140
    Med28; Mediator complex subunit 28

  3. XM_038533307.1 → XP_038389235.1  mediator of RNA polymerase II transcription subunit 28

    UniProtKB/TrEMBL
    A0A8C0M841, A0A8C0QZL5, A0A8I3MAU1, A0A8P0SJN4
    Conserved Domains (1) summary
    pfam11594
    Location:40 → 140
    Med28; Mediator complex subunit 28

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006585.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    65402933..65411431 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_022417147.2 → XP_022272855.1  mediator of RNA polymerase II transcription subunit 28

    UniProtKB/TrEMBL
    A0A8C0M841, A0A8C0QZL5, A0A8I3MAU1, A0A8P0SJN4
    Conserved Domains (1) summary
    pfam11594
    Location:40 → 140
    Med28; Mediator complex subunit 28

  2. XM_845684.5 → XP_850777.1  mediator of RNA polymerase II transcription subunit 28

    See identical proteins and their annotated locations for XP_850777.1

    UniProtKB/TrEMBL
    A0A8C0M841, A0A8C0QZL5, A0A8I3MAU1, A0A8P0SJN4
    Conserved Domains (1) summary
    pfam11594
    Location:40 → 140
    Med28; Mediator complex subunit 28

  3. XM_005618542.4 → XP_005618599.1  mediator of RNA polymerase II transcription subunit 28

    See identical proteins and their annotated locations for XP_005618599.1

    UniProtKB/TrEMBL
    A0A8C0M841, A0A8C0QZL5, A0A8I3MAU1, A0A8P0SJN4
    Conserved Domains (1) summary
    pfam11594
    Location:40 → 140
    Med28; Mediator complex subunit 28
Nucleotide Protein
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