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STMN4 stathmin 4 [ Canis lupus familiaris (dog) ]

Gene ID: 486105, updated on 17-Aug-2024

Summary

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Official Symbol
STMN4provided by VGNC
Official Full Name
stathmin 4provided by VGNC
Primary source
VGNC:VGNC:46928
See related
Ensembl:ENSCAFG00845012672
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 25
Exon count:
8
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 25 NC_051829.1 (30523239..30544587)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 25 NC_006607.4 (30919163..30940502)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 25 NC_049246.1 (30500905..30522251)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 25 NC_049285.1 (30453019..30474354)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 25 NC_049766.1 (30334281..30355632)

Chromosome 25 - NC_051829.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC119865943 Neighboring gene uncharacterized LOC119865944 Neighboring gene tripartite motif containing 35 Neighboring gene V-type proton ATPase subunit D-like Neighboring gene 60S ribosomal protein L7-like Neighboring gene uncharacterized LOC102154714

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables tubulin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in microtubule depolymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in neuron projection development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of microtubule polymerization or depolymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
stathmin-4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051829.1 Reference ROS_Cfam_1.0

    Range
    30523239..30544587
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038435358.1 → XP_038291286.1  stathmin-4 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KFF5, A0A8C0P9P3, A0A8I3NHQ3
    Related
    ENSCAFP00845017809.1, ENSCAFT00845022703.1
    Conserved Domains (1) summary
    pfam00836
    Location:76 → 203
    Stathmin; Stathmin family

  2. XM_038435360.1 → XP_038291288.1  stathmin-4 isoform X4

    Conserved Domains (1) summary
    pfam00836
    Location:49 → 176
    Stathmin; Stathmin family

  3. XM_038435357.1 → XP_038291285.1  stathmin-4 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KJ96, A0A8C0RSC9, A0A8I3NPJ8
    Related
    ENSCAFP00845017757.1, ENSCAFT00845022620.1
    Conserved Domains (1) summary
    pfam00836
    Location:76 → 211
    Stathmin; Stathmin family

  4. XM_038435359.1 → XP_038291287.1  stathmin-4 isoform X3

    UniProtKB/TrEMBL
    A0A8C0KEV1, A0A8I3NM27, A0A8P0NAY3
    Related
    ENSCAFP00845017711.1, ENSCAFT00845022567.1
    Conserved Domains (1) summary
    pfam00836
    Location:49 → 184
    Stathmin; Stathmin family

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049285.1 Alternate UMICH_Zoey_3.1

    Range
    30453019..30474354
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038510299.1 → XP_038366227.1  stathmin-4 isoform X2

    Conserved Domains (1) summary
    pfam00836
    Location:76 → 203
    Stathmin; Stathmin family

  2. XM_038510301.1 → XP_038366229.1  stathmin-4 isoform X4

    Conserved Domains (1) summary
    pfam00836
    Location:49 → 176
    Stathmin; Stathmin family

  3. XM_038510298.1 → XP_038366226.1  stathmin-4 isoform X1

    Conserved Domains (1) summary
    pfam00836
    Location:76 → 211
    Stathmin; Stathmin family

  4. XM_038510300.1 → XP_038366228.1  stathmin-4 isoform X3

    Conserved Domains (1) summary
    pfam00836
    Location:49 → 184
    Stathmin; Stathmin family

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049766.1 Alternate UNSW_CanFamBas_1.0

    Range
    30334281..30355632
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038638067.1 → XP_038493995.1  stathmin-4 isoform X2

    Conserved Domains (1) summary
    pfam00836
    Location:76 → 203
    Stathmin; Stathmin family

  2. XM_038638066.1 → XP_038493994.1  stathmin-4 isoform X1

    Conserved Domains (1) summary
    pfam00836
    Location:76 → 211
    Stathmin; Stathmin family

  3. XM_038638069.1 → XP_038493997.1  stathmin-4 isoform X4

    Conserved Domains (1) summary
    pfam00836
    Location:49 → 176
    Stathmin; Stathmin family

  4. XM_038638068.1 → XP_038493996.1  stathmin-4 isoform X3

    Conserved Domains (1) summary
    pfam00836
    Location:49 → 184
    Stathmin; Stathmin family

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049246.1 Alternate UU_Cfam_GSD_1.0

    Range
    30500905..30522251
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038573757.1 → XP_038429685.1  stathmin-4 isoform X2

    UniProtKB/TrEMBL
    A0A8C0KFF5, A0A8C0P9P3, A0A8I3NHQ3
    Conserved Domains (1) summary
    pfam00836
    Location:76 → 203
    Stathmin; Stathmin family

  2. XM_038573759.1 → XP_038429687.1  stathmin-4 isoform X4

    Conserved Domains (1) summary
    pfam00836
    Location:49 → 176
    Stathmin; Stathmin family

  3. XM_038573756.1 → XP_038429684.1  stathmin-4 isoform X1

    UniProtKB/TrEMBL
    A0A8C0KJ96, A0A8C0RSC9, A0A8I3NPJ8
    Conserved Domains (1) summary
    pfam00836
    Location:76 → 211
    Stathmin; Stathmin family

  4. XM_038573758.1 → XP_038429686.1  stathmin-4 isoform X3

    UniProtKB/TrEMBL
    A0A8C0KEV1, A0A8I3NM27, A0A8P0NAY3
    Conserved Domains (1) summary
    pfam00836
    Location:49 → 184
    Stathmin; Stathmin family

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006607.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    30919163..30940502
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_005635681.4 → XP_005635738.1  stathmin-4 isoform X2

    See identical proteins and their annotated locations for XP_005635738.1

    UniProtKB/TrEMBL
    A0A8C0KFF5, A0A8C0P9P3, A0A8I3NHQ3
    Conserved Domains (1) summary
    pfam00836
    Location:76 → 203
    Stathmin; Stathmin family

  2. XM_005635682.4 → XP_005635739.1  stathmin-4 isoform X4

    See identical proteins and their annotated locations for XP_005635739.1

    Conserved Domains (1) summary
    pfam00836
    Location:49 → 176
    Stathmin; Stathmin family

  3. XM_843955.6 → XP_849048.1  stathmin-4 isoform X1

    See identical proteins and their annotated locations for XP_849048.1

    UniProtKB/TrEMBL
    A0A8C0KJ96, A0A8C0RSC9, A0A8I3NPJ8
    Conserved Domains (1) summary
    pfam00836
    Location:76 → 211
    Stathmin; Stathmin family

  4. XM_543231.7 → XP_543231.1  stathmin-4 isoform X3

    See identical proteins and their annotated locations for XP_543231.1

    UniProtKB/TrEMBL
    A0A8C0KEV1, A0A8I3NM27, A0A8P0NAY3
    Conserved Domains (1) summary
    pfam00836
    Location:49 → 184
    Stathmin; Stathmin family
Nucleotide Protein
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