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LRBA LPS responsive beige-like anchor protein [ Canis lupus familiaris (dog) ]

Gene ID: 475463, updated on 17-Aug-2024

Summary

Official Symbol
LRBAprovided by VGNC
Official Full Name
LPS responsive beige-like anchor proteinprovided by VGNC
Primary source
VGNC:VGNC:42757
See related
Ensembl:ENSCAFG00845014163
Gene type
protein coding
RefSeq status
MODEL
Organism
Canis lupus familiaris (sub-species: familiaris)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Canidae; Canis
Orthologs
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Genomic context

Location:
chromosome: 15
Exon count:
62
Annotation release Status Assembly Chr Location
106 current ROS_Cfam_1.0 (GCF_014441545.1) 15 NC_051819.1 (48949414..49671557, complement)
106 current Dog10K_Boxer_Tasha (GCF_000002285.5) 15 NC_006597.4 (48612348..49333677, complement)
106 current UU_Cfam_GSD_1.0 (GCF_011100685.1) 15 NC_049236.1 (48636228..49358673, complement)
106 current UMICH_Zoey_3.1 (GCF_005444595.1) 15 NC_049275.1 (48219400..48940351, complement)
106 current UNSW_CanFamBas_1.0 (GCF_013276365.1) 15 NC_049756.1 (48311533..49034645, complement)

Chromosome 15 - NC_051819.1Genomic Context describing neighboring genes Neighboring gene non-POU domain-containing octamer-binding protein-like Neighboring gene voltage dependent anion channel 3 pseudogene Neighboring gene doublecortin like kinase 2 Neighboring gene 40S ribosomal protein S20-like Neighboring gene mab-21 like 2 Neighboring gene 60S ribosomal protein L34-like Neighboring gene Y-box-binding protein 1-like Neighboring gene 60S ribosomal protein L39-like Neighboring gene uncharacterized LOC102151307

Genomic regions, transcripts, and products

Interactions

Products Interactant Other Gene Complex Source Pubs Description

General gene information

Markers

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein kinase binding IEA
Inferred from Electronic Annotation
more info
PubMed 
Process Evidence Code Pubs
involved_in protein localization IEA
Inferred from Electronic Annotation
more info
PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
PubMed 

General protein information

Preferred Names
lipopolysaccharide-responsive and beige-like anchor protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Canis lupus familiaris Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ROS_Cfam_1.0

Genomic

  1. NC_051819.1 Reference ROS_Cfam_1.0

    Range
    48949414..49671557 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038688584.1XP_038544512.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

    UniProtKB/TrEMBL
    A0A8I3RXY0
    Related
    ENSCAFP00845019976.1, ENSCAFT00845025378.1
    Conserved Domains (7) summary
    sd00039
    Location:26082644
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22162492
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822061
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20872184
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:26082856
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  2. XM_038688586.1XP_038544514.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

    UniProtKB/TrEMBL
    A0A8I3RXY0
    Conserved Domains (7) summary
    sd00039
    Location:26082644
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22162492
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822061
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20872184
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:26082856
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  3. XM_038688583.1XP_038544511.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

    UniProtKB/TrEMBL
    A0A8I3RXY0
    Conserved Domains (7) summary
    sd00039
    Location:26082644
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22162492
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822061
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20872184
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:26082856
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  4. XM_038688585.1XP_038544513.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

    UniProtKB/TrEMBL
    A0A8I3RXY0
    Conserved Domains (7) summary
    sd00039
    Location:26082644
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22162492
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822061
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20872184
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:26082856
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  5. XM_038688590.1XP_038544518.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X4

    UniProtKB/TrEMBL
    A0A8I3RXY0
    Conserved Domains (7) summary
    sd00039
    Location:25912627
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22042480
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822049
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20752172
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:25912839
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  6. XM_038688589.1XP_038544517.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X3

    UniProtKB/TrEMBL
    A0A8I3RXY0
    Conserved Domains (7) summary
    sd00039
    Location:25962632
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22042480
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822049
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20752172
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:25962844
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  7. XM_038688588.1XP_038544516.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X2

    UniProtKB/TrEMBL
    A0A8I3RXY0
    Conserved Domains (7) summary
    sd00039
    Location:26032639
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22162492
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822061
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20872184
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:26032851
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  8. XM_038688587.1XP_038544515.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

    UniProtKB/TrEMBL
    A0A8I3RXY0
    Conserved Domains (7) summary
    sd00039
    Location:26082644
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22162492
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822061
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20872184
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:26082856
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  9. XM_038688591.1XP_038544519.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X5

    UniProtKB/TrEMBL
    A0A8C0R8I7
    Conserved Domains (6) summary
    sd00039
    Location:19291965
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:15371813
    Beach; Beige/BEACH domain
    pfam06469
    Location:12031382
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:14081505
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:232
    DUF4704; Domain of unknown function (DUF4704)
    cl29593
    Location:19292177
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  10. XM_038688592.1XP_038544520.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X6

    UniProtKB/TrEMBL
    A0A8C0LSC3
    Conserved Domains (5) summary
    sd00039
    Location:813849
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:421697
    Beach; Beige/BEACH domain
    pfam06469
    Location:87266
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:292389
    PH_BEACH; PH domain associated with Beige/BEACH
    cl29593
    Location:8131061
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  11. XM_038688593.1XP_038544521.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X7

    UniProtKB/TrEMBL
    A0A8C0LSC3
    Conserved Domains (5) summary
    sd00039
    Location:728764
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:336612
    Beach; Beige/BEACH domain
    pfam06469
    Location:5181
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:207304
    PH_BEACH; PH domain associated with Beige/BEACH
    cl29593
    Location:728976
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

Alternate UMICH_Zoey_3.1

Genomic

  1. NC_049275.1 Alternate UMICH_Zoey_3.1

    Range
    48219400..48940351 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038496589.1XP_038352517.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

  2. XM_038496591.1XP_038352519.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

  3. XM_038496587.1XP_038352515.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

  4. XM_038496590.1XP_038352518.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

  5. XM_038496595.1XP_038352523.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X4

  6. XM_038496594.1XP_038352522.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X3

  7. XM_038496593.1XP_038352521.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X2

  8. XM_038496592.1XP_038352520.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

  9. XM_038496596.1XP_038352524.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X5

  10. XM_038496597.1XP_038352525.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X6

    Conserved Domains (5) summary
    sd00039
    Location:813849
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:421697
    Beach; Beige/BEACH domain
    pfam06469
    Location:87266
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:292389
    PH_BEACH; PH domain associated with Beige/BEACH
    cl29593
    Location:8131061
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  11. XM_038496598.1XP_038352526.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X7

    Conserved Domains (5) summary
    sd00039
    Location:728764
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:336612
    Beach; Beige/BEACH domain
    pfam06469
    Location:5181
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:207304
    PH_BEACH; PH domain associated with Beige/BEACH
    cl29593
    Location:728976
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

Alternate UNSW_CanFamBas_1.0

Genomic

  1. NC_049756.1 Alternate UNSW_CanFamBas_1.0

    Range
    48311533..49034645 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038622910.1XP_038478838.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

  2. XM_038622911.1XP_038478839.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

  3. XM_038622909.1XP_038478837.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

  4. XM_038622912.1XP_038478840.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

  5. XM_038622916.1XP_038478844.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X4

  6. XM_038622915.1XP_038478843.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X3

  7. XM_038622914.1XP_038478842.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X2

  8. XM_038622913.1XP_038478841.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

  9. XM_038622917.1XP_038478845.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X5

  10. XM_038622918.1XP_038478846.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X6

    Conserved Domains (5) summary
    sd00039
    Location:813849
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:421697
    Beach; Beige/BEACH domain
    pfam06469
    Location:87266
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:292389
    PH_BEACH; PH domain associated with Beige/BEACH
    cl29593
    Location:8131061
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  11. XM_038622920.1XP_038478848.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X7

    Conserved Domains (5) summary
    sd00039
    Location:728764
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:336612
    Beach; Beige/BEACH domain
    pfam06469
    Location:5181
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:207304
    PH_BEACH; PH domain associated with Beige/BEACH
    cl29593
    Location:728976
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

Alternate UU_Cfam_GSD_1.0

Genomic

  1. NC_049236.1 Alternate UU_Cfam_GSD_1.0

    Range
    48636228..49358673 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_038558983.1XP_038414911.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

    UniProtKB/TrEMBL
    A0A8I3RXY0
    Conserved Domains (7) summary
    sd00039
    Location:26082644
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22162492
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822061
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20872184
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:26082856
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  2. XM_038558984.1XP_038414912.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

    UniProtKB/TrEMBL
    A0A8I3RXY0
    Conserved Domains (7) summary
    sd00039
    Location:26082644
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22162492
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822061
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20872184
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:26082856
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  3. XM_038558982.1XP_038414910.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

    UniProtKB/TrEMBL
    A0A8I3RXY0
    Conserved Domains (7) summary
    sd00039
    Location:26082644
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22162492
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822061
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20872184
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:26082856
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  4. XM_038558985.1XP_038414913.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

    UniProtKB/TrEMBL
    A0A8I3RXY0
    Conserved Domains (7) summary
    sd00039
    Location:26082644
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22162492
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822061
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20872184
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:26082856
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  5. XM_038558989.1XP_038414917.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X4

    UniProtKB/TrEMBL
    A0A8I3RXY0
    Conserved Domains (7) summary
    sd00039
    Location:25912627
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22042480
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822049
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20752172
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:25912839
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  6. XM_038558988.1XP_038414916.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X3

    UniProtKB/TrEMBL
    A0A8I3RXY0
    Conserved Domains (7) summary
    sd00039
    Location:25962632
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22042480
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822049
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20752172
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:25962844
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  7. XM_038558987.1XP_038414915.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X2

    UniProtKB/TrEMBL
    A0A8I3RXY0
    Conserved Domains (7) summary
    sd00039
    Location:26032639
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22162492
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822061
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20872184
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:26032851
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  8. XM_038558986.1XP_038414914.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

    UniProtKB/TrEMBL
    A0A8I3RXY0
    Conserved Domains (7) summary
    sd00039
    Location:26082644
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22162492
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822061
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20872184
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:26082856
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  9. XM_038558990.1XP_038414918.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X5

    UniProtKB/TrEMBL
    A0A8C0R8I7
    Conserved Domains (6) summary
    sd00039
    Location:19291965
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:15371813
    Beach; Beige/BEACH domain
    pfam06469
    Location:12031382
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:14081505
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:232
    DUF4704; Domain of unknown function (DUF4704)
    cl29593
    Location:19292177
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  10. XM_038558991.1XP_038414919.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X6

    UniProtKB/TrEMBL
    A0A8C0LSC3
    Conserved Domains (5) summary
    sd00039
    Location:813849
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:421697
    Beach; Beige/BEACH domain
    pfam06469
    Location:87266
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:292389
    PH_BEACH; PH domain associated with Beige/BEACH
    cl29593
    Location:8131061
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  11. XM_038558992.1XP_038414920.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X7

    UniProtKB/TrEMBL
    A0A8C0LSC3
    Conserved Domains (5) summary
    sd00039
    Location:728764
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:336612
    Beach; Beige/BEACH domain
    pfam06469
    Location:5181
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:207304
    PH_BEACH; PH domain associated with Beige/BEACH
    cl29593
    Location:728976
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

Alternate Dog10K_Boxer_Tasha Primary Assembly

Genomic

  1. NC_006597.4 Alternate Dog10K_Boxer_Tasha Primary Assembly

    Range
    48612348..49333677 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014119362.3XP_013974837.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

    UniProtKB/TrEMBL
    A0A8P0NPH0
    Conserved Domains (7) summary
    sd00039
    Location:26082644
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22162492
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822061
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20872184
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:26082856
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  2. XM_014119364.3XP_013974839.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

    UniProtKB/TrEMBL
    A0A8P0NPH0
    Conserved Domains (7) summary
    sd00039
    Location:26082644
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22162492
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822061
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20872184
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:26082856
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  3. XM_038449591.1XP_038305519.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

    UniProtKB/TrEMBL
    A0A8P0NPH0
    Conserved Domains (7) summary
    sd00039
    Location:26082644
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22162492
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822061
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20872184
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:26082856
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  4. XM_014119363.3XP_013974838.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

    UniProtKB/TrEMBL
    A0A8P0NPH0
    Conserved Domains (7) summary
    sd00039
    Location:26082644
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22162492
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822061
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20872184
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:26082856
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  5. XM_022403496.2XP_022259204.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X4

    UniProtKB/TrEMBL
    A0A8P0NPH0
    Conserved Domains (7) summary
    sd00039
    Location:25912627
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22042480
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822049
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20752172
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:446717
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl25539
    Location:25912839
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  6. XM_005629325.4XP_005629382.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X3

    See identical proteins and their annotated locations for XP_005629382.1

    UniProtKB/TrEMBL
    A0A8P0NPH0
    Conserved Domains (8) summary
    COG2319
    Location:25862853
    WD40; WD40 repeat [General function prediction only]
    pfam02138
    Location:22042480
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822049
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20752172
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:446717
    DUF4704; Domain of unknown function (DUF4704)
    sd00039
    Location:25962632
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:25962844
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
  7. XM_014119367.3XP_013974842.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X2

    UniProtKB/TrEMBL
    A0A8P0NPH0
    Conserved Domains (8) summary
    COG2319
    Location:25932860
    WD40; WD40 repeat [General function prediction only]
    pfam02138
    Location:22162492
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822061
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20872184
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:446717
    DUF4704; Domain of unknown function (DUF4704)
    sd00039
    Location:26032639
    7WD40; WD40 repeat [structural motif]
    cl02567
    Location:26032851
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
  8. XM_038449630.1XP_038305558.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X1

    UniProtKB/TrEMBL
    A0A8P0NPH0
    Conserved Domains (7) summary
    sd00039
    Location:26082644
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:22162492
    Beach; Beige/BEACH domain
    pfam06469
    Location:18822061
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:20872184
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:451711
    DUF4704; Domain of unknown function (DUF4704)
    cl22861
    Location:229376
    LamG; Laminin G domain; Laminin G-like domains are usually Ca++ mediated receptors that can have binding sites for steroids, beta1 integrins, heparin, sulfatides, fibulin-1, and alpha-dystroglycans. Proteins that contain LamG domains serve a variety of ...
    cl29593
    Location:26082856
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  9. XM_038449658.1XP_038305586.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X5

    UniProtKB/TrEMBL
    A0A8C0R8I7
    Conserved Domains (6) summary
    sd00039
    Location:19291965
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:15371813
    Beach; Beige/BEACH domain
    pfam06469
    Location:12031382
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:14081505
    PH_BEACH; PH domain associated with Beige/BEACH
    pfam15787
    Location:232
    DUF4704; Domain of unknown function (DUF4704)
    cl29593
    Location:19292177
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  10. XM_038449667.1XP_038305595.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X6

    UniProtKB/TrEMBL
    A0A8C0LSC3
    Conserved Domains (5) summary
    sd00039
    Location:813849
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:421697
    Beach; Beige/BEACH domain
    pfam06469
    Location:87266
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:292389
    PH_BEACH; PH domain associated with Beige/BEACH
    cl29593
    Location:8131061
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...
  11. XM_038449678.1XP_038305606.1  lipopolysaccharide-responsive and beige-like anchor protein isoform X7

    UniProtKB/TrEMBL
    A0A8C0LSC3
    Conserved Domains (5) summary
    sd00039
    Location:728764
    7WD40; WD40 repeat [structural motif]
    pfam02138
    Location:336612
    Beach; Beige/BEACH domain
    pfam06469
    Location:5181
    DUF1088; Domain of Unknown Function (DUF1088)
    pfam14844
    Location:207304
    PH_BEACH; PH domain associated with Beige/BEACH
    cl29593
    Location:728976
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...