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H2AC25 H2A clustered histone 25 [ Pan troglodytes (chimpanzee) ]

Gene ID: 469700, updated on 29-Mar-2024

Summary

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Official Symbol
H2AC25provided by VGNC
Official Full Name
H2A clustered histone 25provided by VGNC
Primary source
VGNC:VGNC:83685
Locus tag
CK820_G0053409
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
H2AW; HIST3H2A
Orthologs
human mouse all
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Genomic context

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See H2AC25 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 1 NC_072398.2 (20898246..20899084)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 1 NC_072398.1 (210424253..210425091, complement)

Chromosome 1 - NC_072398.2Genomic Context describing neighboring genes Neighboring gene ring finger protein 187 Neighboring gene H2B clustered histone 27 Neighboring gene large ribosomal subunit protein uL23-like Neighboring gene H2B clustered histone 26 Neighboring gene H3.4 histone, cluster member

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein heterodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heterochromatin formation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of chromatin IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of nucleosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
histone H2A type 3
Names
H2A.W histone
histone cluster 3, H2a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072398.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    20898246..20899084
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_016940512.2 → XP_016796001.1  histone H2A type 3

    UniProtKB/TrEMBL
    A0A2J8ITE2, A0A8I3B2C7, H2Q1A3, K7BXV7, K7C4Q6
    Conserved Domains (1) summary
    PTZ00017
    Location:1 → 130
    PTZ00017; histone H2A; Provisional
Nucleotide Protein
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