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TMED4 transmembrane p24 trafficking protein 4 [ Pan troglodytes (chimpanzee) ]

Gene ID: 463382, updated on 29-Mar-2024

Summary

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Official Symbol
TMED4provided by VGNC
Official Full Name
transmembrane p24 trafficking protein 4provided by VGNC
Primary source
VGNC:VGNC:8783
Locus tag
CK820_G0031489
See related
Ensembl:ENSPTRG00000019148
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Orthologs
human mouse all
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Genomic context

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See TMED4 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 6 NC_072404.2 (50439806..50448157, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 7 NC_072405.1 (48080144..48087453, complement)

Chromosome 6 - NC_072404.2Genomic Context describing neighboring genes Neighboring gene NPC1 like intracellular cholesterol transporter 1 Neighboring gene uncharacterized LOC129135480 Neighboring gene DEAD-box helicase 56 Neighboring gene oxoglutarate dehydrogenase Neighboring gene zinc finger MIZ-type containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in Golgi organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intracellular protein transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of canonical NF-kappaB signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
transmembrane emp24 domain-containing protein 4
Names
transmembrane emp24 protein transport domain containing 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_072404.2 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    50439806..50448157 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_063814206.1 → XP_063670276.1  transmembrane emp24 domain-containing protein 4 isoform X1

  2. XM_009453004.5 → XP_009451279.1  transmembrane emp24 domain-containing protein 4 isoform X3

    See identical proteins and their annotated locations for XP_009451279.1

    UniProtKB/TrEMBL
    A0A2J8L9F1
    Conserved Domains (1) summary
    pfam01105
    Location:29 → 178
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD

  3. XM_001145929.5 → XP_001145929.1  transmembrane emp24 domain-containing protein 4 isoform X2

    See identical proteins and their annotated locations for XP_001145929.1

    UniProtKB/TrEMBL
    A0A2J8L9E4, A0A6D2WY01, H2QUI6
    Related
    ENSPTRP00000032713.4
    Conserved Domains (1) summary
    pfam01105
    Location:29 → 222
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD

  4. XM_016957413.3 → XP_016812902.1  transmembrane emp24 domain-containing protein 4 isoform X4

    Conserved Domains (1) summary
    pfam01105
    Location:15 → 163
    EMP24_GP25L; emp24/gp25L/p24 family/GOLD
Nucleotide Protein
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