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SPICE1 spindle and centriole associated protein 1 [ Pan troglodytes (chimpanzee) ]

Gene ID: 460979, updated on 3-Apr-2024

Summary

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Official Symbol
SPICE1provided by VGNC
Official Full Name
spindle and centriole associated protein 1provided by VGNC
Primary source
VGNC:VGNC:2571
Locus tag
CK820_G0023806
See related
Ensembl:ENSPTRG00000015229
Gene type
protein coding
RefSeq status
MODEL
Organism
Pan troglodytes
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Pan
Also known as
CCDC52
Orthologs
human mouse all
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Genomic context

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See SPICE1 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
18
Annotation release Status Assembly Chr Location
RS_2024_02 current NHGRI_mPanTro3-v2.0_pri (GCF_028858775.2) 2 NC_086015.1 (116773448..116843403, complement)
RS_2023_04 previous assembly NHGRI_mPanTro3-v1.1-hic.freeze_pri (GCF_028858775.1) 3 NC_072401.1 (116683366..116752762, complement)

Chromosome 2 - NC_086015.1Genomic Context describing neighboring genes Neighboring gene cilia and flagella associated protein 44 Neighboring gene PHD finger-like domain-containing protein 5A Neighboring gene uncharacterized LOC104005684 Neighboring gene SID1 transmembrane family member 1 Neighboring gene microRNA mir-4446 Neighboring gene uncharacterized LOC112208655

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Markers

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in metaphase chromosome alignment IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic spindle assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of centriole replication IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in centriole IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in centrosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in spindle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coiled-coil domain-containing protein 52; spindle and centriole-associated protein 1
Names
coiled-coil domain containing 52

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_028858775.2-RS_2024_02

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

Genomic

  1. NC_086015.1 Reference NHGRI_mPanTro3-v2.0_pri Primary Assembly

    Range
    116773448..116843403 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_009446165.5 → XP_009444440.3  spindle and centriole-associated protein 1 isoform X2

    UniProtKB/TrEMBL
    K7B9J6

  2. XM_054680903.2 → XP_054536878.1  spindle and centriole-associated protein 1 isoform X4

  3. XM_016941668.4 → XP_016797157.2  spindle and centriole-associated protein 1 isoform X3

  4. XM_009446162.5 → XP_009444437.3  spindle and centriole-associated protein 1 isoform X1

  5. XM_001158122.7 → XP_001158122.3  spindle and centriole-associated protein 1 isoform X2

    UniProtKB/TrEMBL
    K7B9J6

  6. XM_009446164.5 → XP_009444439.3  spindle and centriole-associated protein 1 isoform X1

Nucleotide Protein
Heading Accession and Version

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