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ube2b ubiquitin conjugating enzyme E2 B [ Xenopus tropicalis (tropical clawed frog) ]

Gene ID: 448706, updated on 17-Aug-2024

Summary

Official Symbol
ube2bprovided by Xenbase
Official Full Name
ubiquitin conjugating enzyme E2 Bprovided by Xenbase
Primary source
Xenbase:XB-GENE-1003709
See related
Ensembl:ENSXETG00000026236
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Xenopus tropicalis
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Silurana
Also known as
hr6b; ubc2; hhr6b; rad6b; e2-17kda
Orthologs
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Genomic context

Location:
chromosome: 3
Exon count:
6
Annotation release Status Assembly Chr Location
104 current UCB_Xtro_10.0 (GCF_000004195.4) 3 NC_030679.2 (26517508..26526266, complement)
103 previous assembly Xenopus_tropicalis_v9.1 (GCF_000004195.3) 3 NC_030679.1 (17425145..17433846, complement)

Chromosome 3 - NC_030679.2Genomic Context describing neighboring genes Neighboring gene stimulator of interferon response cGAMP interactor 1 Neighboring gene CDKN2A interacting protein N-terminal like Neighboring gene uncharacterized protein C12orf50 homolog Neighboring gene protein phosphatase 2 catalytic subunit alpha

Genomic regions, transcripts, and products

General gene information

Clone Names

  • MGC89687

Gene Ontology Provided by Xenbase

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 
enables transferase activity IEA
Inferred from Electronic Annotation
more info
 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 

General protein information

Preferred Names
ubiquitin-conjugating enzyme E2 B
Names
ubiquitin conjugating enzyme E2B
ubiquitin-conjugating enzyme E2B (RAD6 homolog)
NP_001005124.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001005124.1NP_001005124.1  ubiquitin-conjugating enzyme E2 B

    See identical proteins and their annotated locations for NP_001005124.1

    Status: PROVISIONAL

    Source sequence(s)
    BC077659
    UniProtKB/TrEMBL
    F7EDM6, Q28FL9, Q6DDC8
    Related
    ENSXETP00000025066.3, ENSXETT00000025066.5
    Conserved Domains (1) summary
    pfam00179
    Location:8145
    UQ_con; Ubiquitin-conjugating enzyme

RefSeqs of Annotated Genomes: Xenopus tropicalis Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference UCB_Xtro_10.0 Primary Assembly

Genomic

  1. NC_030679.2 Reference UCB_Xtro_10.0 Primary Assembly

    Range
    26517508..26526266 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)