ANKRD52 ankyrin repeat domain 52 [Gallus gallus (chicken)] - Gene

Summary

Official Symbol: ANKRD52provided by CGNC
Official Full Name: ankyrin repeat domain 52provided by CGNC
Primary source: CGNC:52797
See related: Ensembl:ENSGALG00010024919
Gene type: protein coding
RefSeq status: PROVISIONAL
Organism: Gallus gallus
Lineage: Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs: human mouse all
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Genomic context

Location:: chromosome: 34

Exon count:: 29

Annotation release	Status	Assembly	Chr	Location
106	current	bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2)	34	NC_052565.1 (1450901..1470960, complement)
106	current	bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2)	34	NC_052606.1 (1466120..1486181)

Chromosome 34 - NC_052565.1 Genomic Context describing neighboring genes

Genomic regions, transcripts, and products

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Genomic Sequence:

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

What's a GeneRIF?

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General gene information

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Gene Ontology Provided by RefSeq

Function	Evidence Code	Pubs
enables protein binding	IEA Inferred from Electronic Annotation more info	PubMed

Process	Evidence Code	Pubs
involved_in protein localization to ciliary inversin compartment	IEA Inferred from Electronic Annotation more info	PubMed

Component	Evidence Code	Pubs
located_in ciliary inversin compartment	IEA Inferred from Electronic Annotation more info	PubMed

General protein information

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Preferred Names: serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C

Names: PP6-ARS-C; serine/threonine-protein phosphatase 6 regulatory subunit ARS-C

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

NM_001012939.2 → NP_001012957.2 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C

Status: PROVISIONAL

Source sequence(s)

JAENSK010000490

Related

ENSGALP00010037634.1, ENSGALT00010060877.1

Conserved Domains (5) summary

PHA02874
Location:588 → 897

PHA02874; ankyrin repeat protein; Provisional

PHA03095
Location:18 → 317

PHA03095; ankyrin-like protein; Provisional

sd00045
Location:76 → 104

ANK; ANK repeat [structural motif]

pfam12796
Location:861 → 954

Ank_2; Ankyrin repeats (3 copies)

pfam13857
Location:952 → 996

Ank_5; Ankyrin repeats (many copies)

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

NC_052565.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Range

1450901..1470960 complement

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_046904959.1 → XP_046760915.1 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X2
XM_040654755.2 → XP_040510689.1 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X1

Conserved Domains (5) summary

PHA02874
Location:603 → 912

PHA02874; ankyrin repeat protein; Provisional

PHA02876
Location:79 → 432

PHA02876; ankyrin repeat protein; Provisional

PHA03095
Location:306 → 674

PHA03095; ankyrin-like protein; Provisional

COG0666
Location:837 → 1022

ANKYR; Ankyrin repeat [Signal transduction mechanisms]

sd00045
Location:91 → 119

ANK; ANK repeat [structural motif]
XM_040654754.2 → XP_040510688.1 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X3

UniProtKB/TrEMBL

A0A8V1A0V2

Related

ENSGALP00010037630.1, ENSGALT00010060873.1

Conserved Domains (4) summary

PHA02874
Location:659 → 968

PHA02874; ankyrin repeat protein; Provisional

PHA03095
Location:89 → 388

PHA03095; ankyrin-like protein; Provisional

COG0666
Location:893 → 1078

ANKYR; Ankyrin repeat [Signal transduction mechanisms]

sd00045
Location:147 → 175

ANK; ANK repeat [structural motif]

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

NC_052606.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Range

1466120..1486181

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GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

XM_046934214.1 → XP_046790170.1 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X4
XM_046934216.1 → XP_046790172.1 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X2
XM_046934215.1 → XP_046790171.1 serine/threonine-protein phosphatase 6 regulatory ankyrin repeat subunit C isoform X1