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WDR89 WD repeat domain 89 [ Gallus gallus (chicken) ]

Gene ID: 423510, updated on 17-Aug-2024

Summary

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Symbol
WDR89provided by CGNC
Full Name
WD repeat domain 89provided by CGNC
Primary source
CGNC:8966
See related
Ensembl:ENSGALG00010017673
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
7
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (52774478..52795783)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (52754991..52775323)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene spectrin repeat containing nuclear envelope protein 2 Neighboring gene translation initiation factor IF-2-like Neighboring gene uncharacterized LOC107053571 Neighboring gene uncharacterized LOC121110834 Neighboring gene sphingosine-1-phosphate phosphatase 1 Neighboring gene uncharacterized LOC101747773 Neighboring gene protein phosphatase 2 regulatory subunit B'epsilon Neighboring gene glycoprotein hormone beta 5 Neighboring gene ras homolog family member J

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WD repeat-containing protein 89

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001277546.4 → NP_001264475.2  WD repeat-containing protein 89

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000215
    UniProtKB/TrEMBL
    A0A8V0YVW6
    Related
    ENSGALP00010025220.1, ENSGALT00010042730.1
    Conserved Domains (2) summary
    sd00039
    Location:34 → 71
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:40 → 353
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    52774478..52795783
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_015287499.4 → XP_015142985.2  WD repeat-containing protein 89 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YVW6
    Related
    ENSGALP00010025230.1, ENSGALT00010042740.1
    Conserved Domains (2) summary
    sd00039
    Location:34 → 71
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:40 → 353
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  2. XM_046941851.1 → XP_046797807.1  WD repeat-containing protein 89 isoform X1

  3. XM_046941855.1 → XP_046797811.1  WD repeat-containing protein 89 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YVW6
    Related
    ENSGALP00010025209.1, ENSGALT00010042719.1

  4. XM_046941854.1 → XP_046797810.1  WD repeat-containing protein 89 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YVW6
    Related
    ENSGALP00010025213.1, ENSGALT00010042723.1

  5. XM_015287497.4 → XP_015142983.2  WD repeat-containing protein 89 isoform X1

    Conserved Domains (2) summary
    sd00039
    Location:49 → 86
    7WD40; WD40 repeat [structural motif]
    cl29593
    Location:55 → 368
    WD40; WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from ...

  6. XM_046941852.1 → XP_046797808.1  WD repeat-containing protein 89 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YVW6

  7. XM_046941853.1 → XP_046797809.1  WD repeat-containing protein 89 isoform X2

    UniProtKB/TrEMBL
    A0A8V0YVW6

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    52754991..52775323
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046918744.1 → XP_046774700.1  WD repeat-containing protein 89 isoform X2

  2. XM_046918738.1 → XP_046774694.1  WD repeat-containing protein 89 isoform X3

  3. XM_046918743.1 → XP_046774699.1  WD repeat-containing protein 89 isoform X2

  4. XM_046918742.1 → XP_046774698.1  WD repeat-containing protein 89 isoform X2

  5. XM_046918739.1 → XP_046774695.1  WD repeat-containing protein 89 isoform X1

  6. XM_046918741.1 → XP_046774697.1  WD repeat-containing protein 89 isoform X2

  7. XM_046918740.1 → XP_046774696.1  WD repeat-containing protein 89 isoform X2

Nucleotide Protein Strain
Heading Accession and Version

Gene LinkOut

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