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ZBTB49 zinc finger and BTB domain containing 49 [ Gallus gallus (chicken) ]

Gene ID: 422847, updated on 5-Mar-2024

Summary

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Symbol
ZBTB49provided by CGNC
Full Name
zinc finger and BTB domain containing 49provided by CGNC
Primary source
CGNC:11155
See related
Ensembl:ENSGALG00010009190
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
ZNF509
Orthologs
human mouse all
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Genomic context

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See ZBTB49 in Genome Data Viewer
Location:
chromosome: 4
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 4 NC_052535.1 (78047547..78083718)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 4 NC_052576.1 (78026278..78062528)

Chromosome 4 - NC_052535.1Genomic Context describing neighboring genes Neighboring gene otopetrin 1 Neighboring gene transmembrane protein 128 Neighboring gene Ly1 antibody reactive Neighboring gene neuronal vesicle trafficking associated 1 Neighboring gene syntaxin 18

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc finger and BTB domain-containing protein 49
Names
zinc finger protein 509

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052535.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    78047547..78083718
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046940741.1 → XP_046796697.1  zinc finger and BTB domain-containing protein 49

    UniProtKB/TrEMBL
    A0A8V0Y0T6

  2. XM_025149805.3 → XP_025005573.2  zinc finger and BTB domain-containing protein 49

    UniProtKB/TrEMBL
    A0A8V0Y0T6
    Conserved Domains (3) summary
    COG5048
    Location:129 → 554
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:510 → 530
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18233
    Location:7 → 118
    BTB_POZ_ZBTB49; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 49 (ZBTB49)

  3. XM_004936168.5 → XP_004936225.2  zinc finger and BTB domain-containing protein 49

    UniProtKB/TrEMBL
    A0A8V0Y0T6
    Related
    ENSGALP00010012558.1, ENSGALT00010021934.1
    Conserved Domains (3) summary
    COG5048
    Location:129 → 554
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:510 → 530
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18233
    Location:7 → 118
    BTB_POZ_ZBTB49; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 49 (ZBTB49)

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052576.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    78026278..78062528
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040669640.2 → XP_040525574.1  zinc finger and BTB domain-containing protein 49

    Conserved Domains (4) summary
    COG5048
    Location:129 → 554
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:510 → 530
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18233
    Location:7 → 118
    BTB_POZ_ZBTB49; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 49 (ZBTB49)
    pfam13465
    Location:550 → 575
    zf-H2C2_2; Zinc-finger double domain

  2. XM_040669642.2 → XP_040525576.1  zinc finger and BTB domain-containing protein 49

    Conserved Domains (4) summary
    COG5048
    Location:129 → 554
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:510 → 530
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18233
    Location:7 → 118
    BTB_POZ_ZBTB49; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 49 (ZBTB49)
    pfam13465
    Location:550 → 575
    zf-H2C2_2; Zinc-finger double domain

  3. XM_046916991.1 → XP_046772947.1  zinc finger and BTB domain-containing protein 49

  4. XM_040669641.2 → XP_040525575.1  zinc finger and BTB domain-containing protein 49

    Conserved Domains (4) summary
    COG5048
    Location:129 → 554
    COG5048; FOG: Zn-finger [General function prediction only]
    sd00017
    Location:510 → 530
    ZF_C2H2; C2H2 Zn finger [structural motif]
    cd18233
    Location:7 → 118
    BTB_POZ_ZBTB49; BTB (Broad-Complex, Tramtrack and Bric a brac)/POZ (poxvirus and zinc finger) domain found in zinc finger and BTB domain-containing protein 49 (ZBTB49)
    pfam13465
    Location:550 → 575
    zf-H2C2_2; Zinc-finger double domain

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_001031164.1: Suppressed sequence

    Description
    NM_001031164.1: This RefSeq was suppressed temporarily based on the calculation that the encoded protein was shorter than proteins from the putative ortholog from human: ZNF509 (GeneID:166793).
Nucleotide Protein Strain
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