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CBLL1 Cbl proto-oncogene like 1 [ Gallus gallus (chicken) ]

Gene ID: 417701, updated on 17-Aug-2024

Summary

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Symbol
CBLL1provided by CGNC
Full Name
Cbl proto-oncogene like 1provided by CGNC
Primary source
CGNC:66292
See related
Ensembl:ENSGALG00010009275
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
HAKAI
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
7
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 1 NC_052532.1 (15008245..15014708)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 1 NC_052573.1 (15145662..15152125)

Chromosome 1 - NC_052532.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121108759 Neighboring gene microRNA 2126 Neighboring gene B-cell receptor associated protein 29 Neighboring gene solute carrier family 26 member 4 Neighboring gene solute carrier family 26 member 3 Neighboring gene dihydrolipoamide dehydrogenase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A large database of chicken bursal ESTs as a resource for the analysis of vertebrate gene function. Abdrakhmanov I, et al. Genome Res, 2000 Dec. PMID 11116100, Free PMC Article
  2. Chicken genomics resource: sequencing and annotation of 35,407 ESTs from single and multiple tissue cDNA libraries and CAP3 assembly of a chicken gene index. Carre W, et al. Physiol Genomics, 2006 May 16. PMID 16554550
  3. A comprehensive collection of chicken cDNAs. Boardman PE, et al. Curr Biol, 2002 Nov 19. PMID 12445392
  4. Full-length cDNAs from chicken bursal lymphocytes to facilitate gene function analysis. Caldwell RB, et al. Genome Biol, 2005. PMID 15642098, Free PMC Article
  5. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein ubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase Hakai
Names
Cas-Br-M (murine) ecotropic retroviral transforming sequence-like 1
Cbl proto-oncogene, E3 ubiquitin protein ligase-like 1
RING-type E3 ubiquitin transferase Hakai
c-Cbl-like protein 1
casitas B-lineage lymphoma-transforming sequence-like protein 1
NP_001007849.1
NP_001384647.1
XP_046762997.1
XP_046762998.1
XP_046762999.1
XP_046786263.1
XP_046786304.1
XP_046786335.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001007848.2 → NP_001007849.1  E3 ubiquitin-protein ligase Hakai

    See identical proteins and their annotated locations for NP_001007849.1

    Status: VALIDATED

    Description
    Transcript Variant: This variant (1) has the long third exon.
    Source sequence(s)
    AJ394917, AJ727912, BI066854, BM440308, BM485951, BU379251, JAENSK010000012
    UniProtKB/Swiss-Prot
    Q5ZHZ4
    UniProtKB/TrEMBL
    A0A1L1RSA4
    Conserved Domains (2) summary
    cd16508
    Location:107 → 148
    RING-HC_HAKAI_like; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Hakai, zinc finger protein 645 (ZNF645), and similar proteins
    pfam18408
    Location:161 → 192
    zf_Hakai; C2H2 Hakai zinc finger domain

  2. NM_001397718.1 → NP_001384647.1  E3 ubiquitin-protein ligase Hakai

    Status: VALIDATED

    Description
    Transcript Variant: This variant (2) has the short third exon.
    Source sequence(s)
    AJ394917, AJ727912, BI066854, BM485951, BU379251, JAENSK010000012
    UniProtKB/TrEMBL
    A0A1L1RSA4, A0A8V0Y5C7
    Related
    ENSGALP00010012720.1, ENSGALT00010022164.1
    Conserved Domains (2) summary
    cd16508
    Location:106 → 147
    RING-HC_HAKAI_like; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Hakai, zinc finger protein 645 (ZNF645), and similar proteins
    pfam18408
    Location:160 → 191
    zf_Hakai; C2H2 Hakai zinc finger domain

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052532.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    15008245..15014708
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046930307.1 → XP_046786263.1  E3 ubiquitin-protein ligase Hakai isoform X1

    UniProtKB/TrEMBL
    A0A1L1RSA4
    Related
    ENSGALP00010012688.1, ENSGALT00010022115.1

  2. XM_046930348.1 → XP_046786304.1  E3 ubiquitin-protein ligase Hakai isoform X1

    UniProtKB/TrEMBL
    A0A1L1RSA4

  3. XM_046930379.1 → XP_046786335.1  E3 ubiquitin-protein ligase Hakai isoform X1

    UniProtKB/TrEMBL
    A0A1L1RSA4

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052573.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    15145662..15152125
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_046907041.1 → XP_046762997.1  E3 ubiquitin-protein ligase Hakai isoform X1

    UniProtKB/TrEMBL
    A0A1L1RSA4

  2. XM_046907042.1 → XP_046762998.1  E3 ubiquitin-protein ligase Hakai isoform X1

    UniProtKB/TrEMBL
    A0A1L1RSA4

  3. XM_046907043.1 → XP_046762999.1  E3 ubiquitin-protein ligase Hakai isoform X1

    UniProtKB/TrEMBL
    A0A1L1RSA4
Nucleotide Protein Strain
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q5ZHZ4.1 GenPept UniProtKB/Swiss-Prot:Q5ZHZ4

Gene LinkOut

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Molecular Biology Databases
Research Materials