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TAF15 TATA-box binding protein associated factor 15 [ Gallus gallus (chicken) ]

Gene ID: 417522, updated on 5-Mar-2024

Summary

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Symbol
TAF15provided by CGNC
Full Name
TATA-box binding protein associated factor 15provided by CGNC
Primary source
CGNC:50532
See related
Ensembl:ENSGALG00010029621
Gene type
protein coding
RefSeq status
MODEL
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 19
Exon count:
16
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 19 NC_052550.1 (4833287..4851421)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 19 NC_052591.1 (4561706..4579834)

Chromosome 19 - NC_052550.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 120A Neighboring gene cytochrome p450 oxidoreductase Neighboring gene rhomboid domain containing 2 Neighboring gene matrix metallopeptidase 28 Neighboring gene growth arrest specific 2 like 2 Neighboring gene RAS like family 10 member B

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription coregulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TATA-binding protein-associated factor 2N
Names
TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052550.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    4833287..4851421
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_415770.7 → XP_415770.2  TATA-binding protein-associated factor 2N isoform X1

    UniProtKB/TrEMBL
    E1BT66
    Related
    ENSGALP00010044313.1, ENSGALT00010071623.1
    Conserved Domains (5) summary
    COG0724
    Location:157 → 352
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    sd00029
    Location:391 → 412
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:387 → 417
    zf-RanBP; Zn-finger in Ran binding protein and others
    cd12535
    Location:265 → 350
    RRM_FUS_TAF15; RNA recognition motif (RRM) found in vertebrate fused in Ewing's sarcoma protein (FUS), TATA-binding protein-associated factor 15 (TAF15) and similar proteins
    NF033849
    Location:3 → 193
    ser_rich_anae_1; serine-rich protein

  2. XM_015296015.3 → XP_015151501.1  TATA-binding protein-associated factor 2N isoform X2

    Conserved Domains (3) summary
    sd00025
    Location:372 → 393
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:368 → 398
    zf-RanBP; Zn-finger in Ran binding protein and others
    cd12535
    Location:246 → 331
    RRM_FUS_TAF15; RNA recognition motif (RRM) found in vertebrate fused in Ewing's sarcoma protein (FUS), TATA-binding protein-associated factor 15 (TAF15) and similar proteins

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052591.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    4561706..4579834
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_040687145.2 → XP_040543079.1  TATA-binding protein-associated factor 2N isoform X1

    UniProtKB/TrEMBL
    E1BT66
    Conserved Domains (5) summary
    COG0724
    Location:157 → 352
    RRM; RNA recognition motif (RRM) domain [Translation, ribosomal structure and biogenesis]
    sd00029
    Location:391 → 412
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:387 → 417
    zf-RanBP; Zn-finger in Ran binding protein and others
    cd12535
    Location:265 → 350
    RRM_FUS_TAF15; RNA recognition motif (RRM) found in vertebrate fused in Ewing's sarcoma protein (FUS), TATA-binding protein-associated factor 15 (TAF15) and similar proteins
    NF033849
    Location:3 → 193
    ser_rich_anae_1; serine-rich protein

  2. XM_040687146.2 → XP_040543080.1  TATA-binding protein-associated factor 2N isoform X2

    Conserved Domains (3) summary
    sd00025
    Location:372 → 393
    zf-RanBP2; RanBP2-type Zn finger [structural motif]
    pfam00641
    Location:368 → 398
    zf-RanBP; Zn-finger in Ran binding protein and others
    cd12535
    Location:246 → 331
    RRM_FUS_TAF15; RNA recognition motif (RRM) found in vertebrate fused in Ewing's sarcoma protein (FUS), TATA-binding protein-associated factor 15 (TAF15) and similar proteins
Nucleotide Protein Strain
Heading Accession and Version

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