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NEK2 NIMA related kinase 2 [ Sus scrofa (pig) ]

Gene ID: 397258, updated on 5-Mar-2024

Summary

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Official Symbol
NEK2provided by VGNC
Official Full Name
NIMA related kinase 2provided by VGNC
Primary source
VGNC:VGNC:90675
See related
Ensembl:ENSSSCG00000015604
Gene type
protein coding
RefSeq status
MODEL
Organism
Sus scrofa
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Artiodactyla; Suina; Suidae; Sus
Expression
Biased expression in ovary (RPKM 23.8), spleen (RPKM 4.8) and 4 other tissues See more
Orthologs
human mouse all
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Genomic context

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See NEK2 in Genome Data Viewer
Location:
chromosome: 9
Exon count:
9
Annotation release Status Assembly Chr Location
106 current Sscrofa11.1 (GCF_000003025.6) 9 NC_010451.4 (131547044..131560527)
105 previous assembly Sscrofa10.2 (GCF_000003025.5) 9 NC_010451.3 (144585644..144599144)

Chromosome 9 - NC_010451.4Genomic Context describing neighboring genes Neighboring gene lysophosphatidylglycerol acyltransferase 1 Neighboring gene uncharacterized LOC102166108 Neighboring gene solute carrier family 30 member 1 Neighboring gene RD3 regulator of GUCY2D

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Expression

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  • Project title: Transcriptome data used for gene annotation
  • Description: Nine kinds of tissues and a mixture of multiple tissues were sequenced for genome annotation
  • BioProject: PRJNA311523
  • Publication: PMID 27646534
  • Analysis date: Thu Dec 14 17:10:49 2017

Bibliography

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Related articles in PubMed

  1. PEDE (Pig EST Data Explorer) has been expanded into Pig Expression Data Explorer, including 10 147 porcine full-length cDNA sequences. Uenishi H, et al. Nucleic Acids Res, 2007 Jan. PMID 17145712, Free PMC Article
  2. PEDE (Pig EST Data Explorer): construction of a database for ESTs derived from porcine full-length cDNA libraries. Uenishi H, et al. Nucleic Acids Res, 2004 Jan 1. PMID 14681463, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine/threonine-protein kinase Nek2
Names
NIMA (never in mitosis gene a)-related kinase 2
serine/threonine protein kinase Nek2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Sus scrofa Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Sscrofa11.1 Primary Assembly

Genomic

  1. NC_010451.4 Reference Sscrofa11.1 Primary Assembly

    Range
    131547044..131560527
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_003130413.3 → XP_003130461.2  serine/threonine-protein kinase Nek2 isoform X1

    UniProtKB/TrEMBL
    A0A480NBD3, A0A8D1PLT3, F1S2U5
    Related
    ENSSSCP00000016543.5, ENSSSCT00000016997.5
    Conserved Domains (1) summary
    cd08217
    Location:7 → 271
    STKc_Nek2; Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 2

  2. XM_021063863.1 → XP_020919522.1  serine/threonine-protein kinase Nek2 isoform X2

    UniProtKB/TrEMBL
    A0A5G2RC59, A0A8D0XHD1
    Related
    ENSSSCP00000068204.1, ENSSSCT00000082452.2
    Conserved Domains (1) summary
    cd08217
    Location:7 → 271
    STKc_Nek2; Catalytic domain of the Serine/Threonine Kinase, Never In Mitosis gene A (NIMA)-related kinase 2
Nucleotide Protein
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