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ITPKA inositol-trisphosphate 3-kinase A [ Gallus gallus (chicken) ]

Gene ID: 395694, updated on 17-Aug-2024

Summary

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Symbol
ITPKAprovided by CGNC
Full Name
inositol-trisphosphate 3-kinase Aprovided by CGNC
Primary source
CGNC:6529
See related
Ensembl:ENSGALG00010022541
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Gallus gallus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Archelosauria; Archosauria; Dinosauria; Saurischia; Theropoda; Coelurosauria; Aves; Neognathae; Galloanserae; Galliformes; Phasianidae; Phasianinae; Gallus
Also known as
IP3KA
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 5
Exon count:
11
Annotation release Status Assembly Chr Location
106 current bGalGal1.mat.broiler.GRCg7b (GCF_016699485.2) 5 NC_052536.1 (24191313..24239780)
106 current bGalGal1.pat.whiteleghornlayer.GRCg7w (GCF_016700215.2) 5 NC_052577.1 (24158733..24207241)

Chromosome 5 - NC_052536.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC121110829 Neighboring gene RTF1 homolog, Paf1/RNA polymerase II complex component Neighboring gene carbohydrate sulfotransferase 9-like Neighboring gene leukocyte receptor tyrosine kinase Neighboring gene RNA polymerase II associated protein 1 Neighboring gene transmembrane protein 151B-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. A novel A-isoform-like inositol 1,4,5-trisphosphate 3-kinase from chicken erythrocytes exhibits alternative splicing and conservation of intron positions between vertebrates and invertebrates. Bertsch U, et al. Gene, 1999 Mar 4. PMID 10072759
  2. Transcriptome analysis for the chicken based on 19,626 finished cDNA sequences and 485,337 expressed sequence tags. Hubbard SJ, et al. Genome Res, 2005 Jan. PMID 15590942, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol tetrakisphosphate kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables inositol-1,4,5-trisphosphate 3-kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in inositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
inositol-trisphosphate 3-kinase A
Names
inositol 1,4,5-trisphosphate 3-kinase A
NP_001378918.1

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001391989.2 → NP_001378918.1  inositol-trisphosphate 3-kinase A

    Status: VALIDATED

    Source sequence(s)
    JAENSK010000214
    UniProtKB/TrEMBL
    A0A8V0ZNX6, F1NXP1
    Related
    ENSGALP00010033176.1, ENSGALT00010054878.1
    Conserved Domains (1) summary
    pfam03770
    Location:249 → 460
    IPK; Inositol polyphosphate kinase

RefSeqs of Annotated Genomes: Gallus gallus Annotation Release 106 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

Genomic

  1. NC_052536.1 Reference bGalGal1.mat.broiler.GRCg7b Primary Assembly

    Range
    24191313..24239780
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_005860012.2 RNA Sequence

  2. XR_005860016.2 RNA Sequence

  3. XR_005860017.2 RNA Sequence

  4. XR_005860018.2 RNA Sequence

  5. XR_005860020.2 RNA Sequence

  6. XR_005860019.2 RNA Sequence

  7. XR_005860021.2 RNA Sequence

  8. XR_006939299.1 RNA Sequence

  9. XR_005860014.2 RNA Sequence

  10. XR_005860013.2 RNA Sequence

  11. XR_005860024.2 RNA Sequence

  12. XR_006939300.1 RNA Sequence

  13. XR_005860025.2 RNA Sequence

  14. XR_005860023.2 RNA Sequence

  15. XR_005860028.2 RNA Sequence

  16. XR_005860022.2 RNA Sequence

Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

Genomic

  1. NC_052577.1 Alternate bGalGal1.pat.whiteleghornlayer.GRCg7w

    Range
    24158733..24207241
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

RNA

  1. XR_006934658.1 RNA Sequence

  2. XR_006934661.1 RNA Sequence

  3. XR_006934662.1 RNA Sequence

  4. XR_006934663.1 RNA Sequence

  5. XR_006934665.1 RNA Sequence

  6. XR_006934664.1 RNA Sequence

  7. XR_006934666.1 RNA Sequence

  8. XR_006934657.1 RNA Sequence

  9. XR_006934660.1 RNA Sequence

  10. XR_006934659.1 RNA Sequence

  11. XR_006934669.1 RNA Sequence

  12. XR_006934671.1 RNA Sequence

  13. XR_006934670.1 RNA Sequence

  14. XR_006934668.1 RNA Sequence

  15. XR_006934672.1 RNA Sequence

  16. XR_006934667.1 RNA Sequence

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NM_204881.1: Suppressed sequence

    Description
    NM_204881.1: This RefSeq was removed because currently there is insufficient support for the transcript and the protein.
Nucleotide Protein Strain
Heading Accession and Version

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