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COPE COPI coat complex subunit epsilon [ Zalophus californianus (California sea lion) ]

Gene ID: 113917396, updated on 15-Mar-2024

Summary

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Gene symbol
COPE
Gene description
COPI coat complex subunit epsilon
See related
EnsemblRapid:ENSZCAG00025012394
Gene type
protein coding
RefSeq status
MODEL
Organism
Zalophus californianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Otariidae; Zalophus
Orthologs
human mouse all
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Genomic context

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See COPE in Genome Data Viewer
Location:
chromosome: 1
Exon count:
10
Annotation release Status Assembly Chr Location
101 current mZalCal1.pri.v2 (GCF_009762305.2) 1 NC_045595.1 (14253332..14268830, complement)
100 previous assembly zalCal2.2 (GCF_900631625.1) Unplaced Scaffold NW_020884868.1 (198948812..198963049)

Chromosome 1 - NC_045595.1Genomic Context describing neighboring genes Neighboring gene UPF1 RNA helicase and ATPase Neighboring gene growth differentiation factor 1 Neighboring gene ceramide synthase 1 Neighboring gene DEAD-box helicase 49 Neighboring gene homer scaffold protein 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural molecule activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of COPI vesicle coat IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
coatomer subunit epsilon
Names
coatomer protein complex subunit epsilon

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Zalophus californianus Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mZalCal1.pri.v2 Primary Assembly

Genomic

  1. NC_045595.1 Reference mZalCal1.pri.v2 Primary Assembly

    Range
    14253332..14268830 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_035728753.1 → XP_035584646.1  coatomer subunit epsilon

    UniProtKB/TrEMBL
    A0A6P9FGD6
    Related
    ENSZCAP00025019558.1, ENSZCAT00025022212.1
    Conserved Domains (2) summary
    sd00006
    Location:185 → 210
    TPR; TPR repeat [structural motif]
    pfam04733
    Location:17 → 305
    Coatomer_E; Coatomer epsilon subunit
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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